RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 C12orf50Q8NA57 414 aaPredicted RBP11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 ING5Q8WYH8 240 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 ZNF516Q92618 1163 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 SEMA4DQ92854 862 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 DNASE1L2Q92874 299 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 CLSTN3Q9BQT9 956 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 TSGA10Q9BZW7 698 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 GPR88Q9GZN0 384 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 PDE11AQ9HCR9 933 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 UBE2TQ9NPD8 197 aaPredicted RBP11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 TOPORSQ9NS56 1045 aaPredicted RBP11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 ADAM28Q9UKQ2 775 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 IPPQ9Y573 584 aa11.98□□□□□ -0.49
CSNK1E-202ENST00000366216 KIAA1549LQ6ZVL6 1849 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 ATP8B3O60423 1300 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 TMEM8BA6NDV4 472 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 ZNF263O14978 683 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 PJA2O43164 708 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 B4GALT5O43286 388 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 KIF5CO60282 957 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 KCNK5O95279 499 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 ITGA4P13612 1032 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 TNNI1P19237 187 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 MLH1P40692 756 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 MFAP3P55082 362 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 GAS6Q14393 721 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 SLC18A3Q16572 532 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 TMEM132AQ24JP5 1023 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 PABPC1LQ4VXU2 614 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 WDR44Q5JSH3 913 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 C10orf76Q5T2E6 689 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 STPG1Q5TH74 334 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 EEF1DP3Q658K8 133 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 SYT10Q6XYQ8 523 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 ENOSF1Q7L5Y1 443 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 KIAA1328Q86T90 577 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 ARHGEF19Q8IW93 802 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 TAS1R2Q8TE23 839 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 KIF12Q96FN5 646 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 NT5C1BQ96P26 610 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 CDT1Q9H211 546 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 LMAN1LQ9HAT1 526 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 LUC7LQ9NQ29 371 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 RXFP3Q9NSD7 469 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 R3HCC1Q9Y3T6 440 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 PCDHA13Q9Y5I0 950 aa11.97□□□□□ -0.49
CSNK1E-202ENST00000366216 DENND4CQ5VZ89 1909 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 SRRM3A6NNA2 597 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 KRT86O43790 486 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 TSPAN1O60635 241 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 ERLIN2O94905 339 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 IL18RAPO95256 599 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 POU2F2P09086 479 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 CLTAP09496 248 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 ZNF806P0C7X5 589 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 HARSP12081 509 aaKnown RBP11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 ARF4P18085 180 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 TNFSF9P41273 254 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 MAGEA1P43355 309 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 WNT7BP56706 349 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 GNG11P61952 73 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 GCNT1Q02742 428 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 PTK2Q05397 1052 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 SLC5A9Q2M3M2 681 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 TDRD10Q5VZ19 366 aaKnown RBP11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 PSAPL1Q6NUJ1 521 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 ZNF571Q7Z3V5 609 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 APBB1IPQ7Z5R6 666 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 VPS36Q86VN1 386 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 LONP2Q86WA8 852 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 FAM3CQ92520 227 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 JAKMIP2Q96AA8 810 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 ELSPBP1Q96BH3 223 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 CPB2Q96IY4 423 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 PDZD7Q9H5P4 517 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 LZTFL1Q9NQ48 299 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 C2orf42Q9NWW7 574 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 GDE1Q9NZC3 331 aa11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 DNMT3BQ9UBC3 853 aaKnown RBP11.96□□□□□ -0.49
CSNK1E-202ENST00000366216 ABCA7Q8IZY2 2146 aa11.96□□□□□ -0.5
CSNK1E-202ENST00000366216 CEP192Q8TEP8 1941 aa11.96□□□□□ -0.5
CSNK1E-202ENST00000366216 ANK1P16157 1881 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 LAMA5O15230 3695 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 NCANO14594 1321 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 PTPRJQ12913 1337 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 CITO14578 2027 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 A0A0U1RQJ8 604 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 A0A1B0GUA9 196 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 FOXN3O00409 490 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 MAP3K13O43283 966 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 HLA-DRAP01903 254 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 FCARP24071 287 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 AXLP30530 894 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 CYP27A1Q02318 531 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 ARID5AQ03989 594 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 GFPT1Q06210 699 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 RING1Q06587 406 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 NCBP1Q09161 790 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 KIF5AQ12840 1032 aa11.95□□□□□ -0.5
CSNK1E-202ENST00000366216 CCDC6Q16204 474 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms