RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ATG14Q6ZNE5 492 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 FRMD5Q7Z6J6 570 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 C18orf8Q96DM3 657 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 PCDHGA3Q9Y5H0 932 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 MUTP22033 750 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 PAX3P23760 479 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 IFNGR2P38484 337 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 MAPKAPK2P49137 400 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 IL5RAQ01344 420 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 MROH9Q5TGP6 573 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 S100A13Q99584 98 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 POLG2Q9UHN1 485 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 EIF3LQ9Y262 564 aaKnown RBP13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 TRAPPC11Q7Z392 1133 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 CCDC24Q8N4L8 307 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 USP38Q8NB14 1042 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 RNASE11Q8TAA1 199 aaKnown RBP13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 EPS8L3Q8TE67 593 aaKnown RBP13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 SPATA33Q96N06 139 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 FRMD8P1Q9BZ68 369 aaPredicted RBP13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 GRIP2Q9C0E4 1043 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 SLITRK2Q9H156 845 aa13.65□□□□□ -0.22
SRGAP3-201ENST00000360413 MPOP05164 745 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 CDC25CP30307 473 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 GNA13Q14344 377 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 RORBQ92753 470 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 EPB41L4AQ9HCS5 686 aaPredicted RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 STARD13Q9Y3M8 1113 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 PSMC5P62195 406 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 CLEC16AQ2KHT3 1053 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 PADI6Q6TGC4 694 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 OTOAQ7RTW8 1153 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 CHSY1Q86X52 802 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 GPD1LQ8N335 351 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 PRCCQ92733 491 aaPredicted RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 ZNF184Q99676 751 aaPredicted RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 STK33Q9BYT3 514 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 ING3Q9NXR8 418 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 GARTP22102 1010 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 ROR2Q01974 943 aaKnown RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 ALG11Q2TAA5 492 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 KCNT1Q5JUK3 1230 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 SLC25A24Q6NUK1 477 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 PARNO95453 639 aaKnown RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 POU4F1Q01851 419 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 NR1D2Q14995 579 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 SGO1Q5FBB7 561 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 TYW3Q6IPR3 259 aaKnown RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 APBB2Q92870 758 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 ZKSCAN4Q969J2 545 aaPredicted RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 KLHL28Q9NXS3 571 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 FAM20BO75063 409 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 CSNK2BP67870 215 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 ITGA9Q13797 1035 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 SVOPQ8N4V2 548 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 CYP39A1Q9NYL5 469 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 CHKBQ9Y259 395 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 RAD54BQ9Y620 910 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 CITO14578 2027 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 TOB2Q14106 344 aaPredicted RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 GPR63Q9BZJ6 419 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 MYH3P11055 1940 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 ABCB1P08183 1280 aaPredicted RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 WARSP23381 471 aaKnown RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 HOXA13P31271 388 aaPredicted RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 CYP51A1Q16850 503 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 ELOA2Q8IYF1 753 aaPredicted RBP13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 SLC25A41Q8N5S1 370 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 AHSPQ9NZD4 102 aa13.64□□□□□ -0.23
SRGAP3-201ENST00000360413 ABCC2Q92887 1545 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 RBP5P82980 135 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 ERFEQ4G0M1 354 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 AGAP9Q5VTM2 703 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 REXO1L1PQ8IX06 675 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 DPF2Q92785 391 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 LENG1Q96BZ8 264 aaPredicted RBP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 RRN3Q9NYV6 651 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 SH3BP4Q9P0V3 963 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 PVALEFA0A1B0GWK0 134 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 E9PBE3 544 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 PLEKHA8P1O95397 391 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 ABATP80404 500 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 CAMK2GQ13555 558 aaPredicted RBP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 UBXN6Q9BZV1 441 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 TMBIM4Q9HC24 238 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 JPH1Q9HDC5 661 aaPredicted RBP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 YWHAQP27348 245 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 BCAP31P51572 246 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 USP11P51784 963 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 STX4Q12846 297 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 NDUFAF6Q330K2 333 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 NEK5Q6P3R8 708 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 FBXO42Q6P3S6 717 aa13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 METTL5Q9NRN9 209 aaKnown RBP13.63□□□□□ -0.23
SRGAP3-201ENST00000360413 CCDC182A6NF36 153 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms