RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 TTC26A0AVF1 554 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 SLC40A1Q9NP59 571 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 COMMD9Q9P000 198 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 RUVBL2Q9Y230 463 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 OR6B1O95007 311 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 HLA-DQA2P01906 255 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 ARHGDIBP52566 201 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 SFSWAPQ12872 951 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 KCNT1Q5JUK3 1230 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 PRR29P0C7W0 189 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 ITGA1P56199 1179 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 GEMIN4P57678 1058 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 TXNRD1Q16881 649 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 RUNDC3AQ59EK9 446 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 RIBC1Q8N443 379 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 C9orf72Q96LT7 481 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 PDGFRAP16234 1089 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 MAPK1P28482 360 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 ALDH9A1P49189 494 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 NLGN1Q8N2Q7 840 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 BLOC1S5Q8TDH9 187 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 WBP11Q9Y2W2 641 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 KHDRBS3O75525 346 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 NCAM1P13591 858 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 CAMK1Q14012 370 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 NOD2Q9HC29 1040 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 PAK5Q9P286 719 aa17.88■□□□□ 0.45
CACNA1A-201ENST00000360228 AGRPO00253 132 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 SPAG6O75602 509 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 LRIG3Q6UXM1 1119 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 IQCF2Q8IXL9 164 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 RNF149Q8NC42 400 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 KCNH4Q9UQ05 1017 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 ZNF579Q8NAF0 562 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 ZNF671Q8TAW3 534 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 WRNIP1Q96S55 665 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 ETAA1Q9NY74 926 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 PDS5AQ29RF7 1337 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 SSNA1O43805 119 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 POLD3Q15054 466 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 FAM136AQ96C01 138 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 VPS33BQ9H267 617 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 H3BN98 237 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 TIMM44O43615 452 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 EID3Q8N140 333 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 ARL10Q8N8L6 244 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 SERPINB12Q96P63 405 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 COMMD8Q9NX08 183 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 CYP2D6P10635 497 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 NFKBIZQ9BYH8 718 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 VPS26AO75436 327 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 STAU1O95793 577 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 DNAJC3Q13217 504 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 ATP6AP1LQ52LC2 224 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 OR6J1Q8NGC5 347 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 SEC31BQ9NQW1 1179 aa17.87■□□□□ 0.45
CACNA1A-201ENST00000360228 AGBL2Q5U5Z8 902 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 UNC5CLQ8IV45 518 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 CCDC36Q8IYA8 594 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 DUSP12Q9UNI6 340 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 ZBTB22O15209 634 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 SEMA3DO95025 777 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 VAC14Q08AM6 782 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 FAM71DQ8N9W8 422 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 CHURC1-FNTBB4DL54 471 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 IFNA14P01570 189 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 MGAT5BQ3V5L5 792 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 FAR2Q96K12 515 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 KLF6Q99612 283 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 CNPY3Q9BT09 278 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 TMEM138Q9NPI0 162 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 NPC1L1Q9UHC9 1359 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 SMIM22K7EJ46 135 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 PMPCBO75439 489 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 SUPT7LO94864 414 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 MAGEA4P43358 317 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 NPHP3-ACAD11A0A0J9YXS1 232 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 LRRC14BA6NHZ5 514 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 YY1P25490 414 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 HAO1Q9UJM8 370 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 LOC102724428A0A0B4J2F2 783 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 SIK1P57059 783 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 EFCAB1Q9HAE3 211 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 APEX2Q9UBZ4 518 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 SNX12Q9UMY4 172 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 C2CD2LO14523 706 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 ATG7O95352 703 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 C10orf120Q5SQS8 335 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 CCSAPQ6IQ19 270 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 ZFRQ96KR1 1074 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 LAMC1P11047 1609 aa17.86■□□□□ 0.45
CACNA1A-201ENST00000360228 DENND1BQ6P3S1 775 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 ABRAXAS1Q6UWZ7 409 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 TMEM26Q6ZUK4 368 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 PRKAG3Q9UGI9 489 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 MYH14Q7Z406 1995 aaKnown RBP17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 PCDHB7Q9Y5E2 793 aa17.85■□□□□ 0.45
CACNA1A-201ENST00000360228 BBOX1O75936 387 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms