RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 M0QYT0 321 aa16.58■□□□□ 0.24
COL18A1-203ENST00000359759 PRKCEQ02156 737 aa16.58■□□□□ 0.24
COL18A1-203ENST00000359759 RASA2Q15283 850 aa16.58■□□□□ 0.24
COL18A1-203ENST00000359759 INAQ16352 499 aa16.58■□□□□ 0.24
COL18A1-203ENST00000359759 ATP6AP1LQ52LC2 224 aa16.58■□□□□ 0.24
COL18A1-203ENST00000359759 ARMC4Q5T2S8 1044 aa16.58■□□□□ 0.24
COL18A1-203ENST00000359759 DCUN1D5Q9BTE7 237 aa16.58■□□□□ 0.24
COL18A1-203ENST00000359759 ASB14A6NK59 587 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 CCT8P50990 548 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 PDZK1Q5T2W1 519 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 MMGT1Q8N4V1 131 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 ABI2Q9NYB9 513 aaPredicted RBP16.57■□□□□ 0.24
COL18A1-203ENST00000359759 NPHP4O75161 1426 aaPredicted RBP16.57■□□□□ 0.24
COL18A1-203ENST00000359759 CFAP99D6REC4 459 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 ATP6V1G2O95670 118 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 RCAN1P53805 252 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 KLHDC7AQ5VTJ3 777 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 RNFT2Q96EX2 444 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 NARS2Q96I59 477 aaKnown RBP16.57■□□□□ 0.24
COL18A1-203ENST00000359759 KLK14Q9P0G3 267 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 DYNC1LI2O43237 492 aaPredicted RBP16.57■□□□□ 0.24
COL18A1-203ENST00000359759 EPHB2P29323 1055 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 VAC14Q08AM6 782 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 FIG4Q92562 907 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 SEMA4DQ92854 862 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 WDCPQ9H6R7 721 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 SCUBE2Q9NQ36 999 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 GPATCH2LQ9NWQ4 482 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 ASNA1O43681 348 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 NFICP08651 508 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 NEDD8Q15843 81 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 SCARA3Q6AZY7 606 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 APOBEC3FQ8IUX4 373 aaKnown RBP16.57■□□□□ 0.24
COL18A1-203ENST00000359759 MYCBPAPQ8TBZ2 947 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 LRRC39Q96DD0 335 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 OLFM1Q99784 485 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 ADAM30Q9UKF2 790 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 CNOT3O75175 753 aaKnown RBP16.57■□□□□ 0.24
COL18A1-203ENST00000359759 DGAT1O75907 488 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 EFCAB12Q6NXP0 572 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 GPRASP2Q96D09 838 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 TAGLN3Q9UI15 199 aa16.57■□□□□ 0.24
COL18A1-203ENST00000359759 ADGRA3Q8IWK6 1321 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 BAIAP3O94812 1187 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 ACADSBP45954 432 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 TRIQKQ629K1 86 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 SEL1L3Q68CR1 1132 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 NEK10Q6ZWH5 1172 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 TRAPPC11Q7Z392 1133 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 APOL2Q9BQE5 337 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.56■□□□□ 0.24
COL18A1-203ENST00000359759 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 PDS5AQ29RF7 1337 aaKnown RBP16.56■□□□□ 0.24
COL18A1-203ENST00000359759 ZNF839A8K0R7 811 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 STX7O15400 261 aaKnown RBP16.56■□□□□ 0.24
COL18A1-203ENST00000359759 ALDH1A2O94788 518 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 ALOX12P18054 663 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 ACAD10Q6JQN1 1059 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 SYTL1Q8IYJ3 562 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 DPP10Q8N608 796 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 PCDHB2Q9Y5E7 798 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 SNTNA6NMZ2 147 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 EXTL3O43909 919 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 TALDO1P37837 337 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 TBCELQ5QJ74 424 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 ZBTB49Q6ZSB9 765 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 LINC00523Q86TU6 105 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 CYP4Z1Q86W10 505 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 ANKS1AQ92625 1134 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 HPDLQ96IR7 371 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 TPD52L3Q96J77 140 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 PPP1R10Q96QC0 940 aaKnown RBP16.56■□□□□ 0.24
COL18A1-203ENST00000359759 TMBIM4Q9HC24 238 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 CYP7B1O75881 506 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 CD4P01730 458 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 XKR3Q5GH77 459 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 OOSP2Q86WS3 158 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 RTL3Q8N8U3 475 aaKnown RBP16.56■□□□□ 0.24
COL18A1-203ENST00000359759 ZSWIM2Q8NEG5 633 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 TIPINQ9BVW5 301 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 SCAF8Q9UPN6 1271 aaKnown RBP16.56■□□□□ 0.24
COL18A1-203ENST00000359759 CEP170Q5SW79 1584 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 GNG14A0A1W2PPG7 69 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 A0A1W2PQJ5 194 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 RPS6KA5O75582 802 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 DSG3P32926 999 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 RAP1GAPP47736 663 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 YWHAZP63104 245 aaKnown RBP16.56■□□□□ 0.24
COL18A1-203ENST00000359759 USP49Q70CQ1 688 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 PPP1R2P1Q96PQ5 205 aa16.56■□□□□ 0.24
COL18A1-203ENST00000359759 PAIP1Q9H074 479 aaKnown RBP16.56■□□□□ 0.24
COL18A1-203ENST00000359759 C2orf81A6NN90 581 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 FNTAP49354 379 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 SNX30Q5VWJ9 437 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 SLC13A5Q86YT5 568 aaPredicted RBP16.55■□□□□ 0.24
COL18A1-203ENST00000359759 AHI1Q8N157 1196 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 TERB1Q8NA31 727 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 CCSER1Q9C0I3 900 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 IPPQ9Y573 584 aa16.55■□□□□ 0.24
COL18A1-203ENST00000359759 IL18RAPO95256 599 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms