RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 METTL16Q86W50 562 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 RIN3Q8TB24 985 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 BLOC1S5Q8TDH9 187 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 L3MBTL3Q96JM7 780 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 SH3GL3Q99963 347 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 METTL5Q9NRN9 209 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 CYP39A1Q9NYL5 469 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 KANSL3Q9P2N6 904 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 PCDHGA4Q9Y5G9 962 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 F9P00740 461 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ENO1P06733 434 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 PCNAP12004 261 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 FDPSP14324 419 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 GGCXP38435 758 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 PRR5LQ6MZQ0 368 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 PPP1R16AQ96I34 528 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 SH3GL2Q99962 352 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 GOLPH3Q9H4A6 298 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 MLXIPLQ9NP71 852 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 AAR2Q9Y312 384 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 KLHL2O95198 593 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 HLA-DRAP01903 254 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 TNNI3P19429 210 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ITIH2P19823 946 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 MSH3P20585 1137 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 E2F4Q16254 413 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 EMC10Q5UCC4 262 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ARHGAP17Q68EM7 881 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 MREGQ8N565 214 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 DTNBP1Q96EV8 351 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 SGSM3Q96HU1 749 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ADGRE3Q9BY15 652 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 TMEM117Q9H0C3 514 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 CCDC134Q9H6E4 229 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ETNK1Q9HBU6 452 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ADARB2Q9NS39 739 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ANKEF1Q9NU02 776 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 CACNA1FO60840 1977 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 TBKBP1A7MCY6 615 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 NDUFS2O75306 463 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ATP6V1C1P21283 382 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 EDRF1Q3B7T1 1238 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 WLSQ5T9L3 541 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 NLRP14Q86W24 1093 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 UNC45BQ8IWX7 931 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 BHMTQ93088 406 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 CAVIN3Q969G5 261 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 NSUN4Q96CB9 384 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 CCT7Q99832 543 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 RANBP17Q9H2T7 1088 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 EXOSC4Q9NPD3 245 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 DIABLOQ9NR28 239 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 RAB6BQ9NRW1 208 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 KLC4Q9NSK0 619 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 STMN3Q9NZ72 180 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 TMCC3Q9ULS5 477 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 POLR1DQ9Y2S0 133 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 GNG14A0A1W2PPG7 69 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 SMIM22K7EJ46 135 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 PSTPIP1O43586 416 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ADCY3O60266 1144 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 GNRH1P01148 92 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 YY1P25490 414 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 PSMA4P25789 261 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 HSPA13P48723 471 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 SERPINB8P50452 374 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 PKN2Q16513 984 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 GPAT2Q6NUI2 795 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 C11orf88Q6PI97 169 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 C16orf86Q6ZW13 317 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 NLRP9Q7RTR0 991 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 MCCC1Q96RQ3 725 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 UXTQ9UBK9 157 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 EPHX2P34913 555 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 FIGNQ5HY92 759 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 SYCP2LQ5T4T6 812 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 SPATA21Q7Z572 469 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF557Q8N988 423 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 DNAJC1Q96KC8 554 aaKnown RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 EPN3Q9H201 632 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 POLD4Q9HCU8 107 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 AHSPQ9NZD4 102 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 NR2E3Q9Y5X4 410 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 CCDC189A1A4V9 331 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ICAM1P05362 532 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 LHX1P48742 406 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 EFEMP1Q12805 493 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 NFIAQ12857 509 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 RABL6Q3YEC7 729 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 TCEAL5Q5H9L2 206 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 AGAP9Q5VTM2 703 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 P3H2Q8IVL5 708 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 SPATA18Q8TC71 538 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 AENQ8WTP8 325 aaKnown RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 EME1Q96AY2 570 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 TRIM8Q9BZR9 551 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PHACTR1Q9C0D0 580 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CRYL1Q9Y2S2 319 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PP2D1A8MPX8 630 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms