RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 STXBP5Q5T5C0 1151 aa18.87■□□□□ 0.61
PDLIM7-202ENST00000355841 POTEHQ6S545 545 aa18.87■□□□□ 0.61
PDLIM7-202ENST00000355841 ST13P5Q8NFI4 369 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-202ENST00000355841 SHKBP1Q8TBC3 707 aa18.87■□□□□ 0.61
PDLIM7-202ENST00000355841 SLC35F5Q8WV83 523 aa18.87■□□□□ 0.61
PDLIM7-202ENST00000355841 ATXN2LQ8WWM7 1075 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-202ENST00000355841 NECTIN4Q96NY8 510 aa18.87■□□□□ 0.61
PDLIM7-202ENST00000355841 ASB2Q96Q27 587 aa18.87■□□□□ 0.61
PDLIM7-202ENST00000355841 CAPN11Q9UMQ6 739 aa18.87■□□□□ 0.61
PDLIM7-202ENST00000355841 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.87■□□□□ 0.612e-7■■□□□ 12.8
PDLIM7-202ENST00000355841 A0A1W2PQJ5 194 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 GABBR2O75899 941 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 SETSIPP0DME0 302 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 YWHAQP27348 245 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 CYP4F8P98187 520 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 TAF10Q12962 218 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 TEAD2Q15562 447 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 SFMBT2Q5VUG0 894 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 IRF2BP2Q7Z5L9 587 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 WDTC1Q8N5D0 677 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 NDRG1Q92597 394 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 RPGRIP1Q96KN7 1286 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 MYRFLQ96LU7 910 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 EDEM3Q9BZQ6 932 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 PDCL3Q9H2J4 239 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 ATXN3LQ9H3M9 355 aa18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 CHORDC1Q9UHD1 332 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 LUC7L2Q9Y383 392 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-202ENST00000355841 TADA3O75528 432 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 F11P03951 625 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 CHRNB2P17787 502 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 PLA2G4AP47712 749 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 PGFP49763 221 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 KIF11P52732 1056 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 ZBED6P86452 979 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 ASIC2Q16515 512 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 PUS10Q3MIT2 529 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■□□□□ 9
PDLIM7-202ENST00000355841 C1orf131Q8NDD1 294 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 FGF13Q92913 245 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 TRMT2BQ96GJ1 504 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 CEP295NLQ96MC4 621 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 MYADMQ96S97 322 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 TTLL2Q9BWV7 592 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 PNPLA8Q9NP80 782 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 ST7Q9NRC1 585 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 MYO6Q9UM54 1294 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 PCDHGC3Q9UN70 934 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 RTN3O95197 1032 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 ABL1P00519 1130 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 SKILP12757 684 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 LCP1P13796 627 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 FERP16591 822 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 GBP2P32456 591 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 TKTL1P51854 596 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 FMO1Q01740 532 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 ADIGQ0VDE8 80 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 ZNF397Q8NF99 534 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 FBXO32Q969P5 355 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 MCRS1Q96EZ8 462 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 MRFAP1L1Q96HT8 127 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 ZSWIM3Q96MP5 696 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 PHF7Q9BWX1 381 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 GMIPQ9P107 970 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 TJP2Q9UDY2 1190 aa18.85■□□□□ 0.61
PDLIM7-202ENST00000355841 ZNF197O14709 1029 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 ADCY5O95622 1261 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 USP17L7P0C7H9 530 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 BMP1P13497 986 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 ADKP55263 362 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 CDR2Q01850 454 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 RAB41Q5JT25 222 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 SMYD5Q6GMV2 418 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 NPAS3Q8IXF0 933 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 LEMD2Q8NC56 503 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 UBXN6Q9BZV1 441 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 LRRC4Q9HBW1 653 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 AVENQ9NQS1 362 aaPredicted RBP18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 SEPT11Q9NVA2 429 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 IL37Q9NZH6 218 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 AIPL1Q9NZN9 384 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 UXTQ9UBK9 157 aaPredicted RBP18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 FAM50BQ9Y247 325 aa18.84■□□□□ 0.61
PDLIM7-202ENST00000355841 CDC25CP30307 473 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 TXNDC8Q6A555 127 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 CPA5Q8WXQ8 436 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 IQCDQ96DY2 449 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 SLITRK1Q96PX8 696 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 GCNAQ96QF7 691 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 PCDHB18PQ96TA0 734 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 ULBP1Q9BZM6 244 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 LHX5Q9H2C1 402 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 SLITRK6Q9H5Y7 841 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 HAUS4Q9H6D7 363 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 USP3Q9Y6I4 520 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 GREB1Q4ZG55 1949 aa18.83■□□□□ 0.61
PDLIM7-202ENST00000355841 C2orf78A6NCI8 922 aa18.82■□□□□ 0.6
PDLIM7-202ENST00000355841 C2CD4DB7Z1M9 353 aa18.82■□□□□ 0.6
PDLIM7-202ENST00000355841 KLHL30Q0D2K2 578 aa18.82■□□□□ 0.6
PDLIM7-202ENST00000355841 TBX2Q13207 712 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms