RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RPS6KL1Q9Y6S9 549 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZNF335Q9H4Z2 1342 aaPredicted RBP13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 LCA5LO95447 670 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 SERPINE1P05121 402 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 ME2P23368 584 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZC2HC1CQ53FD0 456 aaPredicted RBP13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 TMEM63BQ5T3F8 832 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 THEMIS2Q5TEJ8 643 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 FAM9CQ8IZT9 166 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 MTMR8Q96EF0 704 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 SPON2Q9BUD6 331 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 IL25Q9H293 177 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 KLHL31Q9H511 634 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 VTA1Q9NP79 307 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 VTI1BQ9UEU0 232 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 UGGT1Q9NYU2 1555 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 WFS1O76024 890 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 PRKCBP05771 671 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 CCDC130P13994 396 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 TALDO1P37837 337 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 NR1H2P55055 460 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 SNX17Q15036 470 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 HLFQ16534 295 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 ERMARDQ5T6L9 678 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 KDELC2Q7Z4H8 507 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 ERO1BQ86YB8 467 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 CKAP2Q8WWK9 683 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 DEPDC7Q96QD5 511 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 RMND5AQ9H871 391 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 CACNA2D2Q9NY47 1150 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 SORCS3Q9UPU3 1222 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 SUPT7LO94864 414 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 ACOT2P49753 483 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 PRKAA2P54646 552 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 ZNF543Q08ER8 600 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 NEDD8Q15843 81 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 TCHHL1Q5QJ38 904 aaPredicted RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 MAGEC3Q8TD91 643 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 TLR10Q9BXR5 811 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 KBTBD4Q9NVX7 518 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 COMMD8Q9NX08 183 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 NCKIPSDQ9NZQ3 722 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 GTF2H1P32780 548 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 CRKP46108 304 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 TRAF2Q12933 501 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 SPANXN2Q5MJ10 180 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 DHFR2Q86XF0 187 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 SETD9Q8NE22 299 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 SH3KBP1Q96B97 665 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 RUVBL2Q9Y230 463 aaKnown RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 FAM196BA6NMK8 535 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 FOXN3O00409 490 aaPredicted RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 CDC25CP30307 473 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 RGS7P49802 495 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 MAPK11Q15759 364 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 ZNF571Q7Z3V5 609 aaPredicted RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 TCP10LQ8TDR4 215 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 NIF3L1Q9GZT8 377 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 PCDH9Q9HC56 1237 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 KCNK4Q9NYG8 393 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 SELENONQ9NZV5 590 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 VPS9D1Q9Y2B5 631 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 TPRKBQ9Y3C4 175 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 ZSCAN5CA6NGD5 496 aaPredicted RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 EXTL3O43909 919 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 SLC1A6P48664 564 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 IL5RAQ01344 420 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 C1DQ13901 141 aaKnown RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 TRIQKQ629K1 86 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 DCUN1D1Q96GG9 259 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 RMI1Q9H9A7 625 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 FAM98BQ52LJ0 330 aaKnown RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 KCNT1Q5JUK3 1230 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 PDZK1Q5T2W1 519 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 SLC10A4Q96EP9 437 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 KCTD14Q9BQ13 255 aaPredicted RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 UBE2OQ9C0C9 1292 aaKnown RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 LRMDAQ9H2I8 198 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 AGPAT3Q9NRZ7 376 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 RNF146Q9NTX7 359 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 KLHL20Q9Y2M5 609 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 PRG3Q9Y2Y8 225 aaPredicted RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 ANXA9O76027 345 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 GUCA1CO95843 209 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 TCF3P15923 654 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 RAD51Q06609 339 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 TRAF3Q13114 568 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 ITGADQ13349 1161 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 ANGPT1Q15389 498 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 BNIPLQ7Z465 357 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 DHRSXQ8N5I4 330 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 ZNF398Q8TD17 642 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 CCDC28BQ9BUN5 200 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 C6orf62Q9GZU0 229 aaPredicted RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 LRRC40Q9H9A6 602 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 CHORDC1Q9UHD1 332 aaPredicted RBP13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 SLC30A1Q9Y6M5 507 aa13.14□□□□□ -0.31
SYNCRIP-201ENST00000355238 PEX1O43933 1283 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms