RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ABHD2P08910 425 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 CD48P09326 243 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 MAGEA4P43358 317 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 BCAT1P54687 386 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 GJA9P57773 515 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 IFI35P80217 286 aaPredicted RBP17.48■□□□□ 0.39
SAMM50-201ENST00000350028 BST2Q10589 180 aaKnown RBP17.48■□□□□ 0.39
SAMM50-201ENST00000350028 SREBF2Q12772 1141 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 TFDP2Q14188 446 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 PDK2Q15119 407 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 CCDC14Q49A88 953 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 FAM47CQ5HY64 1035 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 TAOK1Q7L7X3 1001 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 NLRP14Q86W24 1093 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 MAP7D3Q8IWC1 876 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 APPL2Q8NEU8 664 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 KBTBD7Q8WVZ9 684 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 TEKT4Q8WW24 435 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 RBM15Q96T37 977 aaKnown RBP eCLIP17.48■□□□□ 0.39
SAMM50-201ENST00000350028 DNAJC17Q9NVM6 304 aaKnown RBP17.48■□□□□ 0.39
SAMM50-201ENST00000350028 SHOC2Q9UQ13 582 aa17.48■□□□□ 0.39
SAMM50-201ENST00000350028 GMNCA6NCL1 334 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 M0QZ92 97 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 TULP2O00295 520 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 SPTLC1O15269 473 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 HUS1O60921 280 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 ETS1P14921 441 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 LRPAP1P30533 357 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 SDC4P31431 198 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 ACADSBP45954 432 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 SLCO1A2P46721 670 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 RPL34P49207 117 aaKnown RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 APLP1P51693 650 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 CDH6P55285 790 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 MRPS6P82932 125 aaKnown RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 HTRA3P83110 453 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 STAT4Q14765 748 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 TAF5Q15542 800 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 C15orf59Q2T9L4 293 aaPredicted RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 RNASEH2BQ5TBB1 312 aaKnown RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 CYP4V2Q6ZWL3 525 aaPredicted RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 B4GALNT4Q76KP1 1039 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 FAM228AQ86W67 206 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 RSAD2Q8WXG1 361 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 KHSRPQ92945 711 aaKnown RBP eCLIP17.47■□□□□ 0.399e-6■■■□□ 17.9
SAMM50-201ENST00000350028 PIWIL1Q96J94 861 aaKnown RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 PWWP2AQ96N64 755 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 TTC25Q96NG3 672 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 TBCBQ99426 244 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 CALN1Q9BXU9 219 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 DPEP3Q9H4B8 488 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 RNF19AQ9NV58 838 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 TRPV2Q9Y5S1 764 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 E7EVH7 732 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 PAPSS1O43252 624 aaPredicted RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 TRAPPC3O43617 180 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 GRAP2O75791 330 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 FAM107AO95990 144 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 IFNB1P01574 187 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 PDGFRBP09619 1106 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 C6orf222P0C671 652 aaPredicted RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 FGFR1P11362 822 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 WARSP23381 471 aaKnown RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 EIF3EP60228 445 aaKnown RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 CRHR2Q13324 411 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 LONRF1Q17RB8 773 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 SH3PXD2AQ5TCZ1 1133 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 TWF2Q6IBS0 349 aaKnown RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 ARCQ7LC44 396 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 RSPH3Q86UC2 560 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 VSIG1Q86XK7 387 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 TOP6BLQ8N6T0 577 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 TRPV1Q8NER1 839 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 MYCBPAPQ8TBZ2 947 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 TNIP3Q96KP6 325 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 CFAP57Q96MR6 1250 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 CCT8L2Q96SF2 557 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 RABEP2Q9H5N1 569 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 PPANQ9NQ55 473 aaKnown RBP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 CREBZFQ9NS37 354 aa17.47■□□□□ 0.39
SAMM50-201ENST00000350028 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.47■□□□□ 0.39
SAMM50-201ENST00000350028 SMAPO00193 183 aa17.46■□□□□ 0.39
SAMM50-201ENST00000350028 MCF2LO15068 1137 aa17.46■□□□□ 0.39
SAMM50-201ENST00000350028 GABBR2O75899 941 aa17.46■□□□□ 0.39
SAMM50-201ENST00000350028 SOX4Q06945 474 aaPredicted RBP17.46■□□□□ 0.39
SAMM50-201ENST00000350028 GNASQ5JWF2 1037 aa17.46■□□□□ 0.39
SAMM50-201ENST00000350028 MFSD14CQ5VZR4 134 aa17.46■□□□□ 0.39
SAMM50-201ENST00000350028 SPATS2Q86XZ4 545 aaKnown RBP17.46■□□□□ 0.39
SAMM50-201ENST00000350028 SCUBE3Q8IX30 993 aa17.46■□□□□ 0.39
SAMM50-201ENST00000350028 ZNF473Q8WTR7 871 aaKnown RBP17.46■□□□□ 0.39
SAMM50-201ENST00000350028 HSFY1Q96LI6 401 aa17.46■□□□□ 0.39
SAMM50-201ENST00000350028 SELENOSQ9BQE4 189 aa17.46■□□□□ 0.39
SAMM50-201ENST00000350028 PHACTR1Q9C0D0 580 aa17.46■□□□□ 0.39
SAMM50-201ENST00000350028 UPF3AQ9H1J1 476 aaKnown RBP17.46■□□□□ 0.39
SAMM50-201ENST00000350028 SAYSD1Q9NPB0 183 aa17.46■□□□□ 0.39
SAMM50-201ENST00000350028 SAE1Q9UBE0 346 aaPredicted RBP17.46■□□□□ 0.39
SAMM50-201ENST00000350028 MYADML2A6NDP7 307 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 PECAM1P16284 738 aaPredicted RBP17.45■□□□□ 0.38
SAMM50-201ENST00000350028 ADORA2BP29275 332 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 PTPN9P43378 593 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms