RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RFX6Q8HWS3 928 aa21.33■■□□□ 1
CHRNA3-202ENST00000348639 CENPTQ96BT3 561 aa21.33■■□□□ 1
CHRNA3-202ENST00000348639 RBM15Q96T37 977 aaKnown RBP eCLIP21.33■■□□□ 1
CHRNA3-202ENST00000348639 GABRQQ9UN88 632 aa21.33■■□□□ 1
CHRNA3-202ENST00000348639 CA12O43570 354 aa21.32■■□□□ 1
CHRNA3-202ENST00000348639 PRPSAP2O60256 369 aa21.32■■□□□ 1
CHRNA3-202ENST00000348639 GRAP2O75791 330 aa21.32■■□□□ 1
CHRNA3-202ENST00000348639 GNL1P36915 607 aaPredicted RBP21.32■■□□□ 1
CHRNA3-202ENST00000348639 TAF6P49848 677 aa21.32■■□□□ 1
CHRNA3-202ENST00000348639 LONRF1Q17RB8 773 aa21.32■■□□□ 1
CHRNA3-202ENST00000348639 TWF2Q6IBS0 349 aaKnown RBP21.32■■□□□ 1
CHRNA3-202ENST00000348639 NLRP14Q86W24 1093 aa21.32■■□□□ 1
CHRNA3-202ENST00000348639 TRIB2Q92519 343 aa21.32■■□□□ 1
CHRNA3-202ENST00000348639 KHSRPQ92945 711 aaKnown RBP eCLIP21.32■■□□□ 1
CHRNA3-202ENST00000348639 CALN1Q9BXU9 219 aa21.32■■□□□ 1
CHRNA3-202ENST00000348639 EBAG9O00559 213 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 PAPSS1O43252 624 aaPredicted RBP21.31■■□□□ 1
CHRNA3-202ENST00000348639 TRAPPC3O43617 180 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 GABBR2O75899 941 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 IFNB1P01574 187 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 FGFR1P11362 822 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 MAGEA4P43358 317 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 SEC24CP53992 1094 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 FCGRTP55899 365 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 SOX4Q06945 474 aaPredicted RBP21.31■■□□□ 1
CHRNA3-202ENST00000348639 SV2CQ496J9 727 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 RNASEH2BQ5TBB1 312 aaKnown RBP21.31■■□□□ 1
CHRNA3-202ENST00000348639 MFSD14CQ5VZR4 134 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 SCUBE3Q8IX30 993 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 ANKRD52Q8NB46 1076 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 APPL2Q8NEU8 664 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 CFAP57Q96MR6 1250 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 GOLGA2P5Q9HBQ8 144 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 PPANQ9NQ55 473 aaKnown RBP21.31■■□□□ 1
CHRNA3-202ENST00000348639 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.31■■□□□ 1
CHRNA3-202ENST00000348639 SHOC2Q9UQ13 582 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 E7EVH7 732 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 FAM107AO95990 144 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 MYCNP04198 464 aaPredicted RBP21.31■■□□□ 1
CHRNA3-202ENST00000348639 CYBAP13498 195 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 CDH6P55285 790 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 BST2Q10589 180 aaKnown RBP21.31■■□□□ 1
CHRNA3-202ENST00000348639 RAB6CQ53S08 254 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 FAM228AQ86W67 206 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 ARRDC4Q8NCT1 418 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 MYCBPAPQ8TBZ2 947 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 CCT8L2Q96SF2 557 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 LPIN3Q9BQK8 851 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 DNAI2Q9GZS0 605 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 RAB6CQ9H0N0 254 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 SNX25Q9H3E2 840 aa21.31■■□□□ 1
CHRNA3-202ENST00000348639 GMNCA6NCL1 334 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 HCRTO43612 131 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 ABHD2P08910 425 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 PDGFRBP09619 1106 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 PECAM1P16284 738 aaPredicted RBP21.3■■□□□ 1
CHRNA3-202ENST00000348639 LMO2P25791 158 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 SDC4P31431 198 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 TM4SF4P48230 202 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 FLT3LGP49771 235 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 BCAT1P54687 386 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 CDO1Q16878 200 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 NBPF20Q3BBV1 942 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 BOLA3Q53S33 107 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 FAM47CQ5HY64 1035 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 TAOK1Q7L7X3 1001 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 PCGF5Q86SE9 256 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 MDM1Q8TC05 714 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 NCAPGQ9BPX3 1015 aa21.3■■□□□ 1
CHRNA3-202ENST00000348639 MTG1Q9BT17 334 aaPredicted RBP21.3■■□□□ 1
CHRNA3-202ENST00000348639 MAK16Q9BXY0 300 aaKnown RBP21.3■■□□□ 1
CHRNA3-202ENST00000348639 M0QZ92 97 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 DESP17661 470 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 RPL34P49207 117 aaKnown RBP21.29■■□□□ 1
CHRNA3-202ENST00000348639 ATP11AP98196 1134 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 PPARDQ03181 441 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 DPYSL3Q14195 570 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 ZNF473Q8WTR7 871 aaKnown RBP21.29■■□□□ 1
CHRNA3-202ENST00000348639 TEKT4Q8WW24 435 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 RSAD2Q8WXG1 361 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 C9orf72Q96LT7 481 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 CYLDQ9NQC7 956 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 CCDC130P13994 396 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 ATP5DP30049 168 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 SCNN1AP37088 669 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 GDF10P55107 478 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 GJA9P57773 515 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 LILRA4P59901 499 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 EIF3EP60228 445 aaKnown RBP21.29■■□□□ 1
CHRNA3-202ENST00000348639 MRPS6P82932 125 aaKnown RBP21.29■■□□□ 1
CHRNA3-202ENST00000348639 MMRN1Q13201 1228 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 TFDP2Q14188 446 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 STAT4Q14765 748 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 PDK2Q15119 407 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 CCDC142Q17RM4 750 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 ZNF618Q5T7W0 954 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 SRLQ86TD4 932 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 MAP7D3Q8IWC1 876 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 FAM172AQ8WUF8 416 aa21.29■■□□□ 1
CHRNA3-202ENST00000348639 TBCBQ99426 244 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms