RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 GLRA2P23416 452 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 CLVS1Q8IUQ0 354 aaPredicted RBP16.89■□□□□ 0.29
MBD1-204ENST00000347968 ERI1Q8IV48 349 aaKnown RBP16.89■□□□□ 0.29
MBD1-204ENST00000347968 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
MBD1-204ENST00000347968 TRIM11Q96F44 468 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 FAM84AQ96KN4 292 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 CCDC106Q9BWC9 280 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 RABGEF1Q9UJ41 708 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 COL1A1P02452 1464 aaPredicted RBP16.89■□□□□ 0.29
MBD1-204ENST00000347968 DENND3A2RUS2 1198 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
MBD1-204ENST00000347968 NR1H2P55055 460 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 RPS8P62241 208 aaKnown RBP16.89■□□□□ 0.29
MBD1-204ENST00000347968 PDAP1Q13442 181 aaKnown RBP16.89■□□□□ 0.29
MBD1-204ENST00000347968 CHI3L2Q15782 390 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 AAGABQ6PD74 315 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 TEKT1Q969V4 418 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 SIAEQ9HAT2 523 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 ZFYVE28Q9HCC9 887 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 HERC5Q9UII4 1024 aaKnown RBP16.89■□□□□ 0.29
MBD1-204ENST00000347968 CDH22Q9UJ99 828 aa16.89■□□□□ 0.29
MBD1-204ENST00000347968 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
MBD1-204ENST00000347968 ZBTB39O15060 712 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 AP1G1O43747 822 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 PHKA2P46019 1235 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 PSMC1P62191 440 aaKnown RBP16.88■□□□□ 0.29
MBD1-204ENST00000347968 C16orf87Q6PH81 154 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 TMCO5AQ8N6Q1 288 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 TRIM56Q9BRZ2 755 aaKnown RBP16.88■□□□□ 0.29
MBD1-204ENST00000347968 TBC1D23Q9NUY8 699 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 BIRC5O15392 142 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 ONECUT3O60422 494 aaPredicted RBP16.88■□□□□ 0.29
MBD1-204ENST00000347968 PEX3P56589 373 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 BBS9Q3SYG4 887 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 NANOGP8Q6NSW7 305 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 PTAR1Q7Z6K3 402 aaPredicted RBP16.88■□□□□ 0.29
MBD1-204ENST00000347968 TXNRD3Q86VQ6 643 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 CATSPER3Q86XQ3 398 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 TDRPQ86YL5 185 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 RHPN2Q8IUC4 686 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 CROCCQ5TZA2 2017 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 F5H6K3 240 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 KRT38O76015 456 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 CDH3P22223 829 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 KLRC2P26717 231 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 ADSSP30520 456 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 SLC18A1P54219 525 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 CTBSQ01459 385 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 ANKRD22Q5VYY1 191 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 TSPAN14Q8NG11 270 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 PYROXD1Q8WU10 500 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 NYXQ9GZU5 481 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 ATAD3AQ9NVI7 634 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 UVRAGQ9P2Y5 699 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 CDC14AQ9UNH5 594 aa16.88■□□□□ 0.29
MBD1-204ENST00000347968 ATP8B3O60423 1300 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 I3L4J1 428 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 LYPLA1O75608 230 aaPredicted RBP16.87■□□□□ 0.29
MBD1-204ENST00000347968 NR4A1P22736 598 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 TCEA1P23193 301 aaKnown RBP16.87■□□□□ 0.29
MBD1-204ENST00000347968 NDST2P52849 883 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 EGFLAMQ63HQ2 1017 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 KYAT3Q6YP21 454 aaKnown RBP16.87■□□□□ 0.29
MBD1-204ENST00000347968 ADGRG6Q86SQ4 1221 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 LZTR1Q8N653 840 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 HELQQ8TDG4 1101 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 EPS8L1Q8TE68 723 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 DHX38Q92620 1227 aaKnown RBP16.87■□□□□ 0.29
MBD1-204ENST00000347968 VPS50Q96JG6 964 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 IFT122Q9HBG6 1241 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 SAE1Q9UBE0 346 aaPredicted RBP16.87■□□□□ 0.29
MBD1-204ENST00000347968 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 TBCAO75347 108 aaKnown RBP16.87■□□□□ 0.29
MBD1-204ENST00000347968 HADHBP55084 474 aaKnown RBP16.87■□□□□ 0.29
MBD1-204ENST00000347968 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 APOFQ13790 326 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 FNBP1LQ5T0N5 605 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 PQLC1Q8N2U9 271 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 ZSWIM2Q8NEG5 633 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 GABPB2Q8TAK5 448 aaPredicted RBP16.87■□□□□ 0.29
MBD1-204ENST00000347968 ERMNQ8TAM6 284 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 FAM84BQ96KN1 310 aaPredicted RBP16.87■□□□□ 0.29
MBD1-204ENST00000347968 BTBD9Q96Q07 612 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 TIMM22Q9Y584 194 aa16.87■□□□□ 0.29
MBD1-204ENST00000347968 CD247P20963 164 aa16.86■□□□□ 0.29
MBD1-204ENST00000347968 FGFR3P22607 806 aa16.86■□□□□ 0.29
MBD1-204ENST00000347968 NRLP54845 237 aa16.86■□□□□ 0.29
MBD1-204ENST00000347968 TAS2R40P59535 323 aa16.86■□□□□ 0.29
MBD1-204ENST00000347968 ZNF423Q2M1K9 1284 aa16.86■□□□□ 0.29
MBD1-204ENST00000347968 POLNQ7Z5Q5 900 aa16.86■□□□□ 0.29
MBD1-204ENST00000347968 MYCT1Q8N699 235 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms