RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 CSTF1Q05048 431 aaKnown RBP21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 TNK2Q07912 1038 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 TAF10Q12962 218 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 NR1H3Q13133 447 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 CCINQ13939 588 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 SCARA5Q6ZMJ2 495 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 PAQR9Q6ZVX9 377 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 ACOT1Q86TX2 421 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 DDX42Q86XP3 938 aaKnown RBP eCLIP21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 SMYD4Q8IYR2 804 aaPredicted RBP21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 CPA6Q8N4T0 437 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 ARL14EPQ8N8R7 260 aaPredicted RBP21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 FBXL13Q8NEE6 735 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 ATRIPQ8WXE1 791 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 CYP2S1Q96SQ9 504 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 MED10Q9BTT4 135 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 FBXO44Q9H4M3 255 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 PNPLA8Q9NP80 782 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 HPS4Q9NQG7 708 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 ZNF638Q14966 1978 aaKnown RBP21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 FANCMQ8IYD8 2048 aa21.26■□□□□ 0.99
CEACAM3-201ENST00000344550 COL4A3Q01955 1670 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 C2orf78A6NCI8 922 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 CLDN5O00501 218 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 SLC9A3R1O14745 358 aaPredicted RBP21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 TNFRSF10BO14763 440 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 OAS1P00973 400 aaKnown RBP21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 HOXA6P31267 233 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 RAP1GAPP47736 663 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 CXCL12P48061 93 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 MXI1P50539 228 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 CACNA2D1P54289 1103 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 CCDC26Q8TAB7 109 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 SLC22A12Q96S37 553 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 HNRNPABQ99729 332 aaKnown RBP21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 DUSP9Q99956 384 aaKnown RBP21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 METTL14Q9HCE5 456 aaKnown RBP21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 TMEM30AQ9NV96 361 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 RAB20Q9NX57 234 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 DUS2Q9NX74 493 aaKnown RBP21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 COQ4Q9Y3A0 265 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 ANAPC1Q9H1A4 1944 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 VPS13AQ96RL7 3174 aa21.25■□□□□ 0.99
CEACAM3-201ENST00000344550 MYO15AQ9UKN7 3530 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 CILPO75339 1184 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 AP1G2O75843 785 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 SOX9P48436 509 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 IFNAR2P48551 515 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 GRSF1Q12849 480 aaKnown RBP eCLIP21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 TMEM196Q5HYL7 178 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 ANKRD40Q6AI12 368 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 TXNDC11Q6PKC3 985 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 SH3RF2Q8TEC5 729 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 CEP63Q96MT8 703 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 KCNK16Q96T55 309 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 EBF3Q9H4W6 596 aa21.24■□□□□ 0.99
CEACAM3-201ENST00000344550 PMM2O15305 246 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 LILRB5O75023 590 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 DRD1P21728 446 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 FBXO43Q4G163 708 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 WDR44Q5JSH3 913 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 SPOPLQ6IQ16 392 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 SLC2A14Q8TDB8 520 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 FBXO32Q969P5 355 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 ECT2Q9H8V3 914 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 APOBEC3GQ9HC16 384 aaKnown RBP21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 KRT82Q9NSB4 513 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 ARMCX3Q9UH62 379 aaPredicted RBP21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 R4GN57 208 aa21.23■□□□□ 0.99
CEACAM3-201ENST00000344550 ATG13O75143 517 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 NFATC1O95644 943 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 ZDHHC11BP0C7U3 371 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 FAM200BP0CF97 657 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 TDGF1P13385 188 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 SLC5A3P53794 718 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 PON2Q15165 354 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 EML3Q32P44 896 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 HECTD3Q5T447 861 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 RIN3Q8TB24 985 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 CYFIP2Q96F07 1278 aa21.22■□□□□ 0.99
CEACAM3-201ENST00000344550 BICDL2A1A5D9 508 aa21.21■□□□□ 0.99
CEACAM3-201ENST00000344550 LEFTY2O00292 366 aa21.21■□□□□ 0.99
CEACAM3-201ENST00000344550 FILIP1Q7Z7B0 1213 aa21.21■□□□□ 0.99
CEACAM3-201ENST00000344550 OTUB2Q96DC9 234 aa21.21■□□□□ 0.99
CEACAM3-201ENST00000344550 SMOQ99835 787 aa21.21■□□□□ 0.99
CEACAM3-201ENST00000344550 RNF38Q9H0F5 515 aa21.21■□□□□ 0.99
CEACAM3-201ENST00000344550 TBC1D14Q9P2M4 693 aa21.21■□□□□ 0.99
CEACAM3-201ENST00000344550 MAN1B1Q9UKM7 699 aa21.21■□□□□ 0.99
CEACAM3-201ENST00000344550 GVINP1Q7Z2Y8 2422 aa21.21■□□□□ 0.99
CEACAM3-201ENST00000344550 E2F8A0AVK6 867 aa21.2■□□□□ 0.98
CEACAM3-201ENST00000344550 OTOL1A6NHN0 477 aaPredicted RBP21.2■□□□□ 0.98
CEACAM3-201ENST00000344550 CCDC130P13994 396 aa21.2■□□□□ 0.98
CEACAM3-201ENST00000344550 ARSAP15289 507 aa21.2■□□□□ 0.98
CEACAM3-201ENST00000344550 CNR2P34972 360 aa21.2■□□□□ 0.98
CEACAM3-201ENST00000344550 GJA4P35212 333 aa21.2■□□□□ 0.98
CEACAM3-201ENST00000344550 GAS6Q14393 721 aa21.2■□□□□ 0.98
CEACAM3-201ENST00000344550 TRIM68Q6AZZ1 485 aa21.2■□□□□ 0.98
CEACAM3-201ENST00000344550 C12orf29Q8N999 325 aa21.2■□□□□ 0.98
CEACAM3-201ENST00000344550 TRIML1Q8N9V2 468 aa21.2■□□□□ 0.98
CEACAM3-201ENST00000344550 SUMF1Q8NBK3 374 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms