RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PCDH9Q9HC56 1237 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 MRPL47Q9HD33 250 aaKnown RBP15.49■□□□□ 0.07
CLCN1-201ENST00000343257 ARHGEF38Q9NXL2 777 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 PCSK1NQ9UHG2 260 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 NARFQ9UHQ1 456 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 BLOC1S6Q9UL45 172 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 PRR12Q9ULL5 1215 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 A0A1B0GTW7 788 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 PDLIM1O00151 329 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 DHRS4L1P0CG22 281 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 ANKRD20A4Q4UJ75 823 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 MROH9Q5TGP6 573 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 VWA5B1Q5TIE3 1220 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 ZFP28Q8NHY6 868 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 SSU72Q9NP77 194 aaKnown RBP15.49■□□□□ 0.07
CLCN1-201ENST00000343257 UBAP1Q9NZ09 502 aa15.49■□□□□ 0.07
CLCN1-201ENST00000343257 hCG_1818297A0A087WSY0 165 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 ADCY3O60266 1144 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 TFAP2AP05549 437 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 CD48P09326 243 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 SMIM18P0DKX4 95 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 SETSIPP0DME0 302 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 MYLK3Q32MK0 819 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 CIAPIN1Q6FI81 312 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 C1orf228Q6PIY5 440 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 UGT2A3Q6UWM9 527 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 FAM163AQ96GL9 167 aaPredicted RBP15.48■□□□□ 0.07
CLCN1-201ENST00000343257 IFT122Q9HBG6 1241 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 ZNF510Q9Y2H8 683 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 DTNAQ9Y4J8 743 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 SNCAIPQ9Y6H5 919 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 NHSQ6T4R5 1651 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 COQ9O75208 318 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 RARRES1P49788 294 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 NCKAP1LP55160 1127 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 JAG1P78504 1218 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 CCDC142Q17RM4 750 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 WDR44Q5JSH3 913 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 TRIM67Q6ZTA4 783 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 TMC7Q7Z402 723 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 CHSY1Q86X52 802 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 ZNF516Q92618 1163 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 WDR11Q9BZH6 1224 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 XPNPEP1Q9NQW7 623 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 FARP1Q9Y4F1 1045 aaPredicted RBP15.48■□□□□ 0.07
CLCN1-201ENST00000343257 TTLL13PA6NNM8 815 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 H3BSA7 217 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 POLR2MP0CAP2 368 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 IL1R1P14778 569 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 RGS2P41220 211 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 WNT7BP56706 349 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 NOMO3P69849 1222 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 ZNF252P-AS1Q0IIN9 211 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 XKR9Q5GH70 373 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 SH2D4BQ5SQS7 431 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 DPY19L2Q6NUT2 758 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 TRIM42Q8IWZ5 723 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 LARGE2Q8N3Y3 721 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 NAT8LQ8N9F0 302 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 MIPOL1Q8TD10 442 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 GPAMQ9HCL2 828 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 ZNRF3Q9ULT6 936 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 TBC1D30Q9Y2I9 924 aa15.48■□□□□ 0.07
CLCN1-201ENST00000343257 SMIM31A0A1B0GVY4 71 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 BOLA2-SMG1P6H3BVE0 249 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 ITM2AO43736 263 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 PEX1O43933 1283 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 CDK4P11802 303 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 CPOXP36551 454 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 ECE1P42892 770 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 ACOT2P49753 483 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 TFDP3Q5H9I0 405 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 FAM182BQ5T319 152 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 RNF148Q8N7C7 305 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 ARHGEF1Q92888 912 aaKnown RBP15.47■□□□□ 0.07
CLCN1-201ENST00000343257 TRIM11Q96F44 468 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 PRICKLE1Q96MT3 831 aaPredicted RBP15.47■□□□□ 0.07
CLCN1-201ENST00000343257 DHRS4Q9BTZ2 278 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 MRPL1Q9BYD6 325 aaKnown RBP15.47■□□□□ 0.07
CLCN1-201ENST00000343257 HOMER2Q9NSB8 354 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 CNTN3Q9P232 1028 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 DNAJC16Q9Y2G8 782 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 GH2P01242 217 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 GMPRP36959 345 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 PTP4A2Q12974 167 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 HNRNPDQ14103 355 aaKnown RBP15.47■□□□□ 0.07
CLCN1-201ENST00000343257 MYBPC2Q14324 1141 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 CYTH1Q15438 398 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 UGCGQ16739 394 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 NPNTQ6UXI9 565 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 AGR3Q8TD06 166 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 PPP1R36Q96LQ0 422 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 TBX20Q9UMR3 447 aa15.47■□□□□ 0.07
CLCN1-201ENST00000343257 F5H423 210 aaPredicted RBP15.46■□□□□ 0.07
CLCN1-201ENST00000343257 HNRNPDLO14979 420 aaKnown RBP15.46■□□□□ 0.07
CLCN1-201ENST00000343257 DKC1O60832 514 aaKnown RBP eCLIP15.46■□□□□ 0.07
CLCN1-201ENST00000343257 HLA-DRAP01903 254 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 RPL10AP62906 217 aaKnown RBP15.46■□□□□ 0.07
CLCN1-201ENST00000343257 MRPS5P82675 430 aaKnown RBP15.46■□□□□ 0.07
CLCN1-201ENST00000343257 PDK1Q15118 436 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms