RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 ZBTB45Q96K62 511 aaPredicted RBP10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 MRPL4Q9BYD3 311 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 CEP41Q9BYV8 373 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 HAPLN2Q9GZV7 340 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 YY1AP1Q9H869 796 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 SIP14410 1827 aa10.92□□□□□ -0.66
CAPRIN1-201ENST00000341394 A0A1W2PQJ5 194 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 FAM187AA6NFU0 413 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 CASQ2O14958 399 aaPredicted RBP10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 TPST1O60507 370 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 CDH16O75309 829 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 CA8P35219 290 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 PHKA2P46019 1235 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 CPT1AP50416 773 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 C1orf220Q5T0J3 134 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 C11orf63Q6NUN7 778 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 ZCCHC23Q6ZST2 131 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 MAP4K3Q8IVH8 894 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 ARHGEF19Q8IW93 802 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 FAM71DQ8N9W8 422 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 PARD3BQ8TEW8 1205 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 DMAC2Q9NW81 257 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 FLRT1Q9NZU1 646 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 NOD1Q9Y239 953 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 GPC4O75487 556 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 ADRB2P07550 413 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 MMP3P08254 477 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 BRD2P25440 801 aaKnown RBP10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 PSMC1P62191 440 aaKnown RBP10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 CUL3Q13618 768 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 CAPSQ13938 189 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 HIF1AQ16665 826 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 IQCKQ8N0W5 287 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 TRIML2Q8N7C3 387 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 C2orf40Q9H1Z8 148 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 RAB6BQ9NRW1 208 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 CDH23Q9H251 3354 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 AIM2O14862 343 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 XPO1O14980 1071 aaKnown RBP10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 ELNP15502 786 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 ABCG1P45844 678 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 GRIK4Q16099 956 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 KRT39Q6A163 491 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 TMEM130Q8N3G9 435 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 FBXL13Q8NEE6 735 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 ATL2Q8NHH9 583 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 TTC8Q8TAM2 541 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 TAS1R2Q8TE23 839 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 CAVIN3Q969G5 261 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 ERLEC1Q96DZ1 483 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 SGF29Q96ES7 293 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 TSSK1BQ9BXA7 367 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 KCND1Q9NSA2 647 aa10.91□□□□□ -0.66
CAPRIN1-201ENST00000341394 GAS2O43903 313 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 ADCY3O60266 1144 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 PGK1P00558 417 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 RARBP10826 455 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 AKR1A1P14550 325 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 TM4SF4P48230 202 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 SLC12A2P55011 1212 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 CDH6P55285 790 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 PRKCZQ05513 592 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 POU5F1BQ06416 359 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 DHX34Q14147 1143 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 PKN2Q16513 984 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 DBN1Q16643 649 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 MORN1Q5T089 497 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 AGBL2Q5U5Z8 902 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 KRT80Q6KB66 452 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 IYDQ6PHW0 289 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 NT5DC3Q86UY8 548 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 CRLF3Q8IUI8 442 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 MIEF2Q96C03 454 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 NAF1Q96HR8 494 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 MRPL47Q9HD33 250 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 SIX2Q9NPC8 291 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 ADA2Q9NZK5 511 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 GABRQQ9UN88 632 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 A0A087WZ62 844 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 PPP1R12AO14974 1030 aaPredicted RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 CST8O60676 142 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 NOL3O60936 208 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 HSPA6P17066 643 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 MSX2P35548 267 aaPredicted RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 CHKAP35790 457 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 ARL4CP56559 192 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 ZNF568Q3ZCX4 644 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 ANKRD20A2Q5SQ80 823 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 ANKRD20A1Q5TYW2 823 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 FOXR2Q6PJQ5 311 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 NLRP9Q7RTR0 991 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 MSL3Q8N5Y2 521 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 FAM136AQ96C01 138 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 FDXACB1Q9BRP7 624 aaPredicted RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 NDE1Q9NXR1 346 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 CFAP73A6NFT4 308 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 FAM155AB1AL88 458 aaPredicted RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 TJP3O95049 919 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 CYP2C9P11712 490 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms