RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 DNAJC16Q9Y2G8 782 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 PLIN4Q96Q06 1357 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 ALOX15BO15296 676 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 NOVP48745 357 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 PARP6Q2NL67 630 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 IYDQ6PHW0 289 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 C4orf19Q8IY42 314 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 TMC2Q8TDI7 906 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 CLMNQ96JQ2 1002 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 IDI2Q9BXS1 227 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 WWP1Q9H0M0 922 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 ZNF302Q9NR11 478 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 RABGEF1Q9UJ41 708 aa14.74□□□□□ -0.05
PCDH8-201ENST00000338862 hCG_1818297A0A087WSY0 165 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 E9PBE3 544 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 KLHL41O60662 606 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 PROCP04070 461 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 C6orf222P0C671 652 aaPredicted RBP14.73□□□□□ -0.05
PCDH8-201ENST00000338862 TBXAS1P24557 533 aaPredicted RBP14.73□□□□□ -0.05
PCDH8-201ENST00000338862 TMED1Q13445 227 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 PIGHQ14442 188 aaPredicted RBP14.73□□□□□ -0.05
PCDH8-201ENST00000338862 CYTH1Q15438 398 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 AMHR2Q16671 573 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 TRIM72Q6ZMU5 477 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 ST13P4Q8IZP2 240 aaPredicted RBP14.73□□□□□ -0.05
PCDH8-201ENST00000338862 ZNF184Q99676 751 aaPredicted RBP14.73□□□□□ -0.05
PCDH8-201ENST00000338862 VCX3BQ9H321 246 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 AVENQ9NQS1 362 aaPredicted RBP14.73□□□□□ -0.05
PCDH8-201ENST00000338862 DDX18Q9NVP1 670 aaKnown RBP14.73□□□□□ -0.05
PCDH8-201ENST00000338862 LGALS13Q9UHV8 139 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 SLC24A2Q9UI40 661 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 TP73O15350 636 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 KRT38O76015 456 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 SNRPAP09012 282 aaKnown RBP14.73□□□□□ -0.05
PCDH8-201ENST00000338862 SFNP31947 248 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 PHKA2P46019 1235 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 LAMB3Q13751 1172 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 MYBPC2Q14324 1141 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 DUOXA2Q1HG44 320 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 IGDCC3Q8IVU1 814 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 ATP2A3Q93084 1043 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 SCYL1Q96KG9 808 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 EBF4Q9BQW3 602 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 PICK1Q9NRD5 415 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 ADCY3O60266 1144 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 DKC1O60832 514 aaKnown RBP eCLIP14.73□□□□□ -0.05
PCDH8-201ENST00000338862 OSBPP22059 807 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 MMP14P50281 582 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 MED21Q13503 144 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 ZACNQ401N2 412 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 RNASEH2BQ5TBB1 312 aaKnown RBP14.73□□□□□ -0.05
PCDH8-201ENST00000338862 VWA5B1Q5TIE3 1220 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 RAPH1Q70E73 1250 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 SH3TC2Q8TF17 1288 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 TRAPPC12Q8WVT3 735 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 TUBB6Q9BUF5 446 aa14.73□□□□□ -0.05
PCDH8-201ENST00000338862 MAGEA13PA6NCF6 341 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 GRIN3BO60391 1043 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 MAPTP10636 758 aaKnown RBP14.72□□□□□ -0.05
PCDH8-201ENST00000338862 KLRC2P26717 231 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 MIPP30301 263 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 GTF2A2P52657 109 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 DSG1Q02413 1049 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 NCAPG2Q86XI2 1143 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 DNAAF3Q8N9W5 541 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.72□□□□□ -0.05
PCDH8-201ENST00000338862 ANKRD36BP1Q96IX9 119 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 WNK4Q96J92 1243 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 GCNAQ96QF7 691 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 SHOC2Q9UQ13 582 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 CLUHO75153 1309 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 A0A0B4J269 797 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 DNAJC6O75061 913 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 ENTPD3O75355 529 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 RBL1P28749 1068 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 GSTT1P30711 240 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 HOXA10P31260 410 aaPredicted RBP14.72□□□□□ -0.05
PCDH8-201ENST00000338862 MOGSQ13724 837 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 DPYSL3Q14195 570 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 UNC5BQ8IZJ1 945 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 PPP1R13LQ8WUF5 828 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 SNRNP27Q8WVK2 155 aaKnown RBP14.72□□□□□ -0.05
PCDH8-201ENST00000338862 TFAP2BQ92481 460 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 AKT1S1Q96B36 256 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 KLC2Q9H0B6 622 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 APPL1Q9UKG1 709 aa14.72□□□□□ -0.05
PCDH8-201ENST00000338862 DHX15O43143 795 aaKnown RBP14.71□□□□□ -0.05
PCDH8-201ENST00000338862 ADRA2BP18089 450 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 TYK2P29597 1187 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 SKIV2L2P42285 1042 aaKnown RBP14.71□□□□□ -0.05
PCDH8-201ENST00000338862 RALGPS1Q5JS13 557 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 DDX56Q9NY93 547 aaKnown RBP14.71□□□□□ -0.05
PCDH8-201ENST00000338862 USP18Q9UMW8 372 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 ZNF541Q9H0D2 1346 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 IL1R2P27930 398 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 SERPINB5P36952 375 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 ZBTB8OSQ8IWT0 167 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 TTC13Q8NBP0 860 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 CERKQ8TCT0 537 aa14.71□□□□□ -0.05
PCDH8-201ENST00000338862 ASCC2Q9H1I8 757 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms