RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PGGT1BP53609 377 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 GEMIN4P57678 1058 aaKnown RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 RPL10AP62906 217 aaKnown RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 PTPN11Q06124 597 aaPredicted RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 SLC12A1Q13621 1099 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 PIGHQ14442 188 aaPredicted RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 FAM83AQ86UY5 434 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 SIX6OS1Q8N1H7 587 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 TTC8Q8TAM2 541 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 LENG1Q96BZ8 264 aaPredicted RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 SPATC1LQ9H0A9 340 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 RNPEPQ9H4A4 650 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 SH3BP1Q9Y3L3 701 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 SPDYE16A6NNV3 312 aaPredicted RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 FSCN2O14926 492 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 VNN1O95497 513 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 FDX1P10109 184 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 KCNA2P16389 499 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 TNFRSF8P28908 595 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 FOXN2P32314 431 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 RPL22P35268 128 aaKnown RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 AVPR1AP37288 418 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 ADCYAP1R1P41586 468 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 THOC5Q13769 683 aaKnown RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 ANKS1BQ7Z6G8 1248 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 CTU1Q7Z7A3 348 aaKnown RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 SLC9A9Q8IVB4 645 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 UNC5BQ8IZJ1 945 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 EXD1Q8NHP7 514 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 MORC4Q8TE76 937 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 EDEM1Q92611 657 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 CCDC97Q96F63 343 aaPredicted RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 DDX27Q96GQ7 796 aaKnown RBP8.58□□□□□ -1.04
HPS4-201ENST00000336873 CGRRF1Q99675 332 aa8.58□□□□□ -1.04
HPS4-201ENST00000336873 DNALI1O14645 258 aaPredicted RBP8.57□□□□□ -1.04
HPS4-201ENST00000336873 FSBPO95073 299 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 CCDC130P13994 396 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 PGM1P36871 562 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 TGFB2P61812 414 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 OGDHQ02218 1023 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 TTLL4Q14679 1199 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 FNBP1LQ5T0N5 605 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 RGS9BPQ6ZS82 235 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 ARMCX6Q7L4S7 300 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 TTC7BQ86TV6 843 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 SLITRK1Q96PX8 696 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 DDX50Q9BQ39 737 aaKnown RBP8.57□□□□□ -1.04
HPS4-201ENST00000336873 ROPN1BQ9BZX4 212 aaPredicted RBP8.57□□□□□ -1.04
HPS4-201ENST00000336873 PORCNQ9H237 461 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 ROPN1Q9HAT0 212 aaPredicted RBP8.57□□□□□ -1.04
HPS4-201ENST00000336873 PTPRHQ9HD43 1115 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 STRIP2Q9ULQ0 834 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 SPTLC1O15269 473 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 LIASO43766 372 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 DCTN3O75935 186 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 CYP2B6P20813 491 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 MLH1P40692 756 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 CASP2P42575 452 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 VCPP55072 806 aaKnown RBP8.57□□□□□ -1.04
HPS4-201ENST00000336873 NCKAP1LP55160 1127 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 RCN1Q15293 331 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 PCSK7Q16549 785 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 CRLF3Q8IUI8 442 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 SCN4BQ8IWT1 228 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 SPATA6LQ8N4H0 392 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 CRYGNQ8WXF5 182 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 CCT6BQ92526 530 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 CELF6Q96J87 481 aaKnown RBP8.57□□□□□ -1.04
HPS4-201ENST00000336873 ZCWPW1Q9H0M4 648 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 LRRC19Q9H756 370 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 MINDY3Q9H8M7 445 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 MAN1C1Q9NR34 630 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 ZFATQ9P243 1243 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 LAMA3Q16787 3333 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 KIAA1551Q9HCM1 1747 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 MYPNQ86TC9 1320 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 APOL1O14791 398 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 MYL3P08590 195 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 IREB2P48200 963 aaKnown RBP8.57□□□□□ -1.04
HPS4-201ENST00000336873 CAV1Q03135 178 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 OLIG2Q13516 323 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 PEX6Q13608 980 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 TRIM72Q6ZMU5 477 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 PPIL6Q8IXY8 311 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 FBXO41Q8TF61 875 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 ZNF75CPQ92670 426 aaPredicted RBP8.57□□□□□ -1.04
HPS4-201ENST00000336873 MOCOSQ96EN8 888 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 PIWIL1Q96J94 861 aaKnown RBP8.57□□□□□ -1.04
HPS4-201ENST00000336873 CLPTM1LQ96KA5 538 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 TWNKQ96RR1 684 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 NT5C1AQ9BXI3 368 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 BTBD7Q9P203 1132 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 SLC4A7Q9Y6M7 1214 aa8.57□□□□□ -1.04
HPS4-201ENST00000336873 MYH4Q9Y623 1939 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 PLIN4Q96Q06 1357 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 SCAMP3O14828 347 aaKnown RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 UGT1A9O60656 530 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 RGS20O76081 388 aa8.56□□□□□ -1.04
HPS4-201ENST00000336873 STK10O94804 968 aaKnown RBP8.56□□□□□ -1.04
HPS4-201ENST00000336873 MICAL2O94851 1124 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms