RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SPATA31C1P0DKV0 1188 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 CYP3A5P20815 502 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 UCNP55089 124 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 LILRA4P59901 499 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 TARDBPQ13148 414 aaKnown RBP eCLIP15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 KCNB1Q14721 858 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 TBC1D25Q3MII6 688 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 C8orf34Q49A92 452 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 SEZ6Q53EL9 994 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 FILIP1Q7Z7B0 1213 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 LRRTM3Q86VH5 581 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 TRMT2BQ96GJ1 504 aaKnown RBP15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 POLD4Q9HCU8 107 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 UBQLN1Q9UMX0 589 aaKnown RBP15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 PCDHGA1Q9Y5H4 931 aa15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.91■□□□□ 0.14
CTHRC1-201ENST00000330295 C2orf78A6NCI8 922 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 BTBD18B2RXH4 712 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 PPEF2O14830 753 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 CYP11A1P05108 521 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 NTSR1P30989 418 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 WASP42768 502 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 ZXDBP98169 803 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 ZBTB6Q15916 424 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 SDHAF4Q5VUM1 108 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 BROXQ5VW32 411 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 PHTF2Q8N3S3 785 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 CD248Q9HCU0 757 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 FTSJ1Q9UET6 329 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 CREBBPQ92793 2442 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 TMEM131Q92545 1883 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 LRRK2Q5S007 2527 aa15.9■□□□□ 0.14
CTHRC1-201ENST00000330295 TBC1D3BA6NDS4 549 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 LEFTY2O00292 366 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 TERTO14746 1132 aaKnown RBP15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 NOL4O94818 638 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 CXCL8P10145 99 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 NCAM1P13591 858 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 HDCP19113 662 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 CD6P30203 668 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 TNFSF9P41273 254 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 GUCY2FP51841 1108 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 ATP2C1P98194 919 aaPredicted RBP15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 SF3A1Q15459 793 aaKnown RBP15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 RHBDF2Q6PJF5 856 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 ZNF574Q6ZN55 896 aaPredicted RBP15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 PIK3AP1Q6ZUJ8 805 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 IPO4Q8TEX9 1081 aaKnown RBP15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 MYRFLQ96LU7 910 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 KCNK4Q9NYG8 393 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 KCNJ14Q9UNX9 436 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 PCDHB5Q9Y5E4 795 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 HEMK1Q9Y5R4 338 aaPredicted RBP15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 FLNCQ14315 2725 aa15.89■□□□□ 0.13
CTHRC1-201ENST00000330295 DOPEY1Q5JWR5 2465 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 A0A1B0GVT2 93 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 ARHGEF35A5YM69 484 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 PRPF40AO75400 957 aaKnown RBP15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 ADH1CP00326 375 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 NFICP08651 508 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 ADH5P11766 374 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 CDK4P11802 303 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 HES3Q5TGS1 186 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 USP49Q70CQ1 688 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 TAS1R3Q7RTX0 852 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 CATSPER3Q86XQ3 398 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 MIB1Q86YT6 1006 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 THEM5Q8N1Q8 247 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 FSIP1Q8NA03 581 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 ZNF248Q8NDW4 579 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 CADM4Q8NFZ8 388 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 KIFAP3Q92845 792 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 ERLEC1Q96DZ1 483 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 ZBTB45Q96K62 511 aaPredicted RBP15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 ZSCAN31Q96LW9 406 aaPredicted RBP15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 DRC1Q96MC2 740 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 AIFM3Q96NN9 605 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 FAM117AQ9C073 453 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 SLC6A17Q9H1V8 727 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 TMEM134Q9H6X4 195 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 PLEKHA5Q9HAU0 1116 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 BRMS1Q9HCU9 246 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 ORC3Q9UBD5 711 aaPredicted RBP15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 DSEQ9UL01 958 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 HCN2Q9UL51 889 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 LIMCH1Q9UPQ0 1083 aa15.88■□□□□ 0.13
CTHRC1-201ENST00000330295 TTC26A0AVF1 554 aa15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 SLC9A3R1O14745 358 aaPredicted RBP15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 TRIM66O15016 1216 aa15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 PCDHGA12O60330 932 aa15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 KRT38O76015 456 aa15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 TRIM29Q14134 588 aa15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 NOLC1Q14978 699 aaKnown RBP eCLIP15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 CALCRLQ16602 461 aa15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 DDR2Q16832 855 aa15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 KIF19Q2TAC6 998 aa15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 DCAF12L1Q5VU92 463 aa15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 DCP1BQ8IZD4 617 aaKnown RBP15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 KIAA1958Q8N8K9 716 aa15.87■□□□□ 0.13
CTHRC1-201ENST00000330295 GTF3C6Q969F1 213 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms