RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 NFASCO94856 1347 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 RTP1P59025 263 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 RCN2Q14257 317 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 GGA3Q9NZ52 723 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 UBA1P22314 1058 aaKnown RBP20.74■□□□□ 0.91
CRLF3-201ENST00000324238 SHKBP1Q8TBC3 707 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 PEBP4Q96S96 227 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 NMUR2Q9GZQ4 415 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 RNF19AQ9NV58 838 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 H7C0C1 242 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 ATP5OP48047 213 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 SCYL2Q6P3W7 929 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 UBR7Q8N806 425 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 MCUR1Q96AQ8 359 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 ACAP3Q96P50 834 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 MAGEB5Q9BZ81 275 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 BATF3Q9NR55 127 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 PIH1D1Q9NWS0 290 aaKnown RBP20.74■□□□□ 0.91
CRLF3-201ENST00000324238 WDR81Q562E7 1941 aa20.74■□□□□ 0.91
CRLF3-201ENST00000324238 INO80B-WBP1J3KQ70 363 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 GSC2O15499 205 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 DKC1O60832 514 aaKnown RBP eCLIP20.73■□□□□ 0.91
CRLF3-201ENST00000324238 LDHAP00338 332 aaKnown RBP20.73■□□□□ 0.91
CRLF3-201ENST00000324238 INHBAP08476 426 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 TCF7P36402 384 aaPredicted RBP20.73■□□□□ 0.91
CRLF3-201ENST00000324238 ASPAP45381 313 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 STAT5BP51692 787 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 DUOXA2Q1HG44 320 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 CES4AQ5XG92 561 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 EEF1DP3Q658K8 133 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 ZCCHC23Q6ZST2 131 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 BRSK2Q8IWQ3 736 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 SYT15Q9BQS2 421 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 INO80BQ9C086 356 aaPredicted RBP20.73■□□□□ 0.91
CRLF3-201ENST00000324238 SDCBP2Q9H190 292 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 SMYD3Q9H7B4 428 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 RAB6BQ9NRW1 208 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 NMRK1Q9NWW6 199 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 WASF2Q9Y6W5 498 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 TRIM49D1C9J1S8 452 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 ADCY3O60266 1144 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 RASSF2P50749 326 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 CDH6P55285 790 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 LRRC38Q5VT99 294 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 CEP128Q6ZU80 1094 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 PPP1R13LQ8WUF5 828 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 DNAJC9Q8WXX5 260 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.73■□□□□ 0.91
CRLF3-201ENST00000324238 DDX56Q9NY93 547 aaKnown RBP20.73■□□□□ 0.91
CRLF3-201ENST00000324238 TAS2R1Q9NYW7 299 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 ZFATQ9P243 1243 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 CAPN9O14815 690 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 ENO1P06733 434 aaKnown RBP20.73■□□□□ 0.91
CRLF3-201ENST00000324238 CXCL8P10145 99 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 KDSRQ06136 332 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 ARMC2Q8NEN0 867 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 COPS5Q92905 334 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 FAF2Q96CS3 445 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 PPP1R12CQ9BZL4 782 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 MAP3K20Q9NYL2 800 aaKnown RBP20.73■□□□□ 0.91
CRLF3-201ENST00000324238 LRRC42Q9Y546 428 aa20.73■□□□□ 0.91
CRLF3-201ENST00000324238 MAFBQ9Y5Q3 323 aaPredicted RBP20.73■□□□□ 0.91
CRLF3-201ENST00000324238 H0YCG3 227 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 WFS1O76024 890 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 HSDL1Q3SXM5 330 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 CATSPERGQ6ZRH7 1159 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 BBS12Q6ZW61 710 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 AS3MTQ9HBK9 375 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 ESRRAP11474 423 aaPredicted RBP20.72■□□□□ 0.91
CRLF3-201ENST00000324238 AMPD1P23109 780 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 RGS7P49802 495 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 ZNF200P98182 395 aaPredicted RBP20.72■□□□□ 0.91
CRLF3-201ENST00000324238 THEMIS2Q5TEJ8 643 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 DCAF15Q66K64 600 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 SLC25A41Q8N5S1 370 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 BTBD10Q9BSF8 475 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 PIDD1Q9HB75 910 aa20.72■□□□□ 0.91
CRLF3-201ENST00000324238 FCHO1O14526 889 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 MAFGO15525 162 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 FAM189A1O60320 539 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 MSCO60682 206 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 SGSM1Q2NKQ1 1148 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 KLHL38Q2WGJ6 581 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 FAM102AQ5T9C2 384 aaPredicted RBP20.71■□□□□ 0.91
CRLF3-201ENST00000324238 SNX30Q5VWJ9 437 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 NSL1Q96IY1 281 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 CYTH2Q99418 400 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 XYLT2Q9H1B5 865 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 BTBD7Q9P203 1132 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 SLC17A6Q9P2U8 582 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 USP18Q9UMW8 372 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 H3BRJ5 948 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 MCF2LO15068 1137 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 TBX10O75333 385 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 MYCNP04198 464 aaPredicted RBP20.71■□□□□ 0.91
CRLF3-201ENST00000324238 GMPRP36959 345 aa20.71■□□□□ 0.91
CRLF3-201ENST00000324238 THOC5Q13769 683 aaKnown RBP20.71■□□□□ 0.91
CRLF3-201ENST00000324238 HADHQ16836 314 aaKnown RBP20.71■□□□□ 0.91
CRLF3-201ENST00000324238 GJC2Q5T442 439 aaPredicted RBP20.71■□□□□ 0.91
CRLF3-201ENST00000324238 TMEM154Q6P9G4 183 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms