RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PIGZQ86VD9 579 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 TEKT4Q8WW24 435 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 SEPT8Q92599 483 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 CENPIQ92674 756 aaPredicted RBP18.71■□□□□ 0.59
RAB39A-201ENST00000320578 C11orf84Q9BUA3 381 aaPredicted RBP18.71■□□□□ 0.59
RAB39A-201ENST00000320578 B3GNT5Q9BYG0 378 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 HPCAL4Q9UM19 191 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 INPP5FQ9Y2H2 1132 aa18.71■□□□□ 0.59
RAB39A-201ENST00000320578 DAPK3O43293 454 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 FBXO21O94952 628 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 KDELR1P24390 212 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 GJC1P36383 396 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 MTFR1Q15390 333 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 MDH1BQ5I0G3 518 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 CLLU1OSQ5K130 101 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 PIWIL1Q96J94 861 aaKnown RBP18.7■□□□□ 0.58
RAB39A-201ENST00000320578 TOX2Q96NM4 488 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 CRISPLD2Q9H0B8 497 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 RNF208Q9H0X6 261 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 CACNG4Q9UBN1 327 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 PCDHB8Q9UN66 801 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 LRRD1A4D1F6 860 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 ENPP3O14638 875 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 ACAT1P24752 427 aaKnown RBP18.7■□□□□ 0.58
RAB39A-201ENST00000320578 TRADDQ15628 312 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 MAPRE1Q15691 268 aaKnown RBP18.7■□□□□ 0.58
RAB39A-201ENST00000320578 ZFYVE27Q5T4F4 411 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 C1orf53Q5VUE5 145 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 ALS2CLQ60I27 953 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 CLEC20AQ6ZU45 233 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 ANKS1BQ7Z6G8 1248 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 TTC13Q8NBP0 860 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 C1orf54Q8WWF1 131 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 RTP3Q9BQQ7 232 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 TRIM51Q9BSJ1 452 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 DDX23Q9BUQ8 820 aaKnown RBP18.7■□□□□ 0.58
RAB39A-201ENST00000320578 HEMGNQ9BXL5 484 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 CHST7Q9NS84 486 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 WBP1LQ9NX94 342 aa18.7■□□□□ 0.58
RAB39A-201ENST00000320578 DRG1Q9Y295 367 aaKnown RBP18.7■□□□□ 0.58
RAB39A-201ENST00000320578 ZNF487B1APH4 448 aa18.69■□□□□ 0.58
RAB39A-201ENST00000320578 HSF2BPO75031 334 aa18.69■□□□□ 0.58
RAB39A-201ENST00000320578 GAS8O95995 478 aa18.69■□□□□ 0.58
RAB39A-201ENST00000320578 HSPA9P38646 679 aaKnown RBP18.69■□□□□ 0.58
RAB39A-201ENST00000320578 HLTFQ14527 1009 aaKnown RBP eCLIP18.69■□□□□ 0.58
RAB39A-201ENST00000320578 INTS6LQ5JSJ4 861 aaKnown RBP18.69■□□□□ 0.58
RAB39A-201ENST00000320578 FAM35AQ86V20 835 aa18.69■□□□□ 0.58
RAB39A-201ENST00000320578 COLGALT2Q8IYK4 626 aa18.69■□□□□ 0.58
RAB39A-201ENST00000320578 THEM5Q8N1Q8 247 aa18.69■□□□□ 0.58
RAB39A-201ENST00000320578 LRRC45Q96CN5 670 aa18.69■□□□□ 0.58
RAB39A-201ENST00000320578 MED10Q9BTT4 135 aa18.69■□□□□ 0.58
RAB39A-201ENST00000320578 PLEKHA4Q9H4M7 779 aa18.69■□□□□ 0.58
RAB39A-201ENST00000320578 CSNK1G1Q9HCP0 422 aa18.69■□□□□ 0.58
RAB39A-201ENST00000320578 MYBPHLA2RUH7 354 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 PI4K2BG5E9Z4 385 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 PIK3R2O00459 728 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 PRPSAP2O60256 369 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 CXCL10P02778 98 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 ARSEP51690 589 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 PTK6Q13882 451 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 PDK2Q15119 407 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 SPDYCQ5MJ68 293 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 BBS12Q6ZW61 710 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 CYP4V2Q6ZWL3 525 aaPredicted RBP18.68■□□□□ 0.58
RAB39A-201ENST00000320578 DBF4BQ8NFT6 615 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 SMARCD1Q96GM5 515 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 PCED1BQ96HM7 432 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 PKMYT1Q99640 499 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 ZWILCHQ9H900 591 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 MED4Q9NPJ6 270 aa18.68■□□□□ 0.58
RAB39A-201ENST00000320578 R3HDM2Q9Y2K5 976 aaKnown RBP18.68■□□□□ 0.58
RAB39A-201ENST00000320578 MDM4O15151 490 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 HOXA2O43364 376 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 FAM153BP0C7A2 387 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 LCP1P13796 627 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 BRCC3P46736 316 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 MRPS5P82675 430 aaKnown RBP18.67■□□□□ 0.58
RAB39A-201ENST00000320578 ADCY1Q08828 1119 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 TAF5Q15542 800 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 FAM153CQ494X1 144 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 RAB41Q5JT25 222 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 STRADAQ7RTN6 431 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 DDX42Q86XP3 938 aaKnown RBP eCLIP18.67■□□□□ 0.58
RAB39A-201ENST00000320578 MAP7D3Q8IWC1 876 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 SCML4Q8N228 414 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 KCTD6Q8NC69 237 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 FAM71BQ8TC56 605 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 NKD2Q969F2 451 aaPredicted RBP18.67■□□□□ 0.58
RAB39A-201ENST00000320578 PKNOX2Q96KN3 472 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 LRRC4Q9HBW1 653 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 PNPLA8Q9NP80 782 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 ZDHHC18Q9NUE0 388 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 TBC1D13Q9NVG8 400 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.67■□□□□ 0.58
RAB39A-201ENST00000320578 WHRNQ9P202 907 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 FAM153AQ9UHL3 310 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 NEU2Q9Y3R4 380 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 TIMM13Q9Y5L4 95 aaPredicted RBP18.67■□□□□ 0.58
RAB39A-201ENST00000320578 HTTP42858 3142 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 TDRD15B5MCY1 1934 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms