RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SLC35B2Q8TB61 432 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 SLC2A14Q8TDB8 520 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 PWWP2AQ96N64 755 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 CAPS2Q9BXY5 557 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 CASP8AP2Q9UKL3 1982 aa19.25■□□□□ 0.67
CCDC43-201ENST00000315286 ACTN2P35609 894 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 THPOP40225 353 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 BCAT1P54687 386 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 PLCB3Q01970 1234 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 SKIDA1Q1XH10 827 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 EMC10Q5UCC4 262 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 IZUMO3Q5VZ72 239 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 TTC19Q6DKK2 380 aaPredicted RBP19.24■□□□□ 0.67
CCDC43-201ENST00000315286 ACTL9Q8TC94 416 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 TSPYL2Q9H2G4 693 aaPredicted RBP19.24■□□□□ 0.67
CCDC43-201ENST00000315286 MIOSQ9NXC5 875 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 DPYSL4O14531 572 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 CYB561D2O14569 222 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 ATP2C2O75185 946 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 ITGAVP06756 1048 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 WARSP23381 471 aaKnown RBP19.24■□□□□ 0.67
CCDC43-201ENST00000315286 SNX16P57768 344 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 OTUD4Q01804 1114 aaKnown RBP19.24■□□□□ 0.67
CCDC43-201ENST00000315286 SP3Q02447 781 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 PTGISQ16647 500 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 P3H1Q32P28 736 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 AGBL2Q5U5Z8 902 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 BBOF1Q8ND07 529 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 CLEC4CQ8WTT0 213 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 TMEM121Q9BTD3 319 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 CALN1Q9BXU9 219 aa19.24■□□□□ 0.67
CCDC43-201ENST00000315286 CDC42EP4Q9H3Q1 356 aaKnown RBP19.24■□□□□ 0.67
CCDC43-201ENST00000315286 GPBP1L1Q9HC44 474 aaPredicted RBP19.24■□□□□ 0.67
CCDC43-201ENST00000315286 DNAJC17Q9NVM6 304 aaKnown RBP19.24■□□□□ 0.67
CCDC43-201ENST00000315286 KIF3CO14782 793 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 GPR182O15218 404 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 TKTP29401 623 aaKnown RBP19.23■□□□□ 0.67
CCDC43-201ENST00000315286 IRAK1P51617 712 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 ARSEP51690 589 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 NOGQ13253 232 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 CCDC142Q17RM4 750 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 WSCD1Q658N2 575 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 TRMT10CQ7L0Y3 403 aaKnown RBP19.23■□□□□ 0.67
CCDC43-201ENST00000315286 RFX6Q8HWS3 928 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 ZDHHC17Q8IUH5 632 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 TNIP3Q96KP6 325 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 DDX23Q9BUQ8 820 aaKnown RBP19.23■□□□□ 0.67
CCDC43-201ENST00000315286 ADAM7Q9H2U9 754 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 NGRNQ9NPE2 291 aaKnown RBP19.23■□□□□ 0.67
CCDC43-201ENST00000315286 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.23■□□□□ 0.67
CCDC43-201ENST00000315286 NOVA2Q9UNW9 492 aaKnown RBP19.23■□□□□ 0.67
CCDC43-201ENST00000315286 PRPSAP2O60256 369 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 CAND2O75155 1236 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 ENDOD1O94919 500 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 LCP1P13796 627 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 SDC4P31431 198 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 HPDP32754 393 aaPredicted RBP19.23■□□□□ 0.67
CCDC43-201ENST00000315286 RPL34P49207 117 aaKnown RBP19.23■□□□□ 0.67
CCDC43-201ENST00000315286 MMRN1Q13201 1228 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 HIBCHQ6NVY1 386 aaPredicted RBP19.23■□□□□ 0.67
CCDC43-201ENST00000315286 SCYL2Q6P3W7 929 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 HACE1Q8IYU2 909 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 B3GALNT2Q8NCR0 500 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 FAM172AQ8WUF8 416 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 C10orf88Q9H8K7 445 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 SLC38A7Q9NVC3 462 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 PADI3Q9ULW8 664 aa19.23■□□□□ 0.67
CCDC43-201ENST00000315286 ARL5CA6NH57 179 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 DCDC2CA8MYV0 355 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 THP07101 528 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 ACAT1P24752 427 aaKnown RBP19.22■□□□□ 0.67
CCDC43-201ENST00000315286 CD52P31358 61 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 CDH6P55285 790 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 GNGT1P63211 74 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 LRRC31Q6UY01 552 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 LEKR1Q6ZMV7 388 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 AGMOQ6ZNB7 445 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 TTC13Q8NBP0 860 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 CCHCR1Q8TD31 782 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 DNAI2Q9GZS0 605 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 TSPYL1Q9H0U9 437 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 RSAD1Q9HA92 442 aa19.22■□□□□ 0.67
CCDC43-201ENST00000315286 SGK1O00141 431 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 GHRP10912 638 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 CLCNKBP51801 687 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 CDR1P51861 262 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 GPS1Q13098 491 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 HOOK3Q86VS8 718 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 FUKQ8N0W3 1084 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 TLDC2A0PJX2 215 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 DNALI1O14645 258 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-201ENST00000315286 GABRDO14764 452 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 MGEA5O60502 916 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 RPLP2P05387 115 aaKnown RBP19.21■□□□□ 0.67
CCDC43-201ENST00000315286 PECAM1P16284 738 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-201ENST00000315286 TFE3P19532 575 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-201ENST00000315286 CST5P28325 142 aaPredicted RBP19.21■□□□□ 0.67
CCDC43-201ENST00000315286 MRPL10Q7Z7H8 261 aaKnown RBP19.21■□□□□ 0.67
CCDC43-201ENST00000315286 SENP8Q96LD8 212 aa19.21■□□□□ 0.67
CCDC43-201ENST00000315286 HNRNPABQ99729 332 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms