RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 LCP1P13796 627 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 PPP2R2AP63151 447 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 PURAQ00577 322 aaKnown RBP13.02□□□□□ -0.33
RNF4-201ENST00000314289 ZNF268Q14587 947 aaPredicted RBP13.02□□□□□ -0.33
RNF4-201ENST00000314289 SLMAPQ14BN4 828 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 ZBTB6Q15916 424 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 HADHQ16836 314 aaKnown RBP13.02□□□□□ -0.33
RNF4-201ENST00000314289 LCLAT1Q6UWP7 414 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 CCDC89Q8N998 374 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 LPPQ93052 612 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 MCRS1Q96EZ8 462 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 ADAM7Q9H2U9 754 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 GABRQQ9UN88 632 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.02□□□□□ -0.33
RNF4-201ENST00000314289 IPPQ9Y573 584 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 DNM1LO00429 736 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 RASGRF2O14827 1237 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 RASSF9O75901 435 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 RGS2P41220 211 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 KYAT1Q16773 422 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 ZC3H12AQ5D1E8 599 aaKnown RBP13.02□□□□□ -0.33
RNF4-201ENST00000314289 FBXO47Q5MNV8 452 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 UBXN11Q5T124 520 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 NIPA2Q8N8Q9 360 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 N4BP2L2Q92802 583 aaPredicted RBP13.02□□□□□ -0.33
RNF4-201ENST00000314289 MLXIPLQ9NP71 852 aa13.02□□□□□ -0.33
RNF4-201ENST00000314289 MANSC4A6NHS7 340 aaPredicted RBP13.01□□□□□ -0.33
RNF4-201ENST00000314289 CDH6P55285 790 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 LRRC38Q5VT99 294 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 C6orf89Q6UWU4 347 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 RNF169Q8NCN4 708 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 SLC12A6Q9UHW9 1150 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 SUFUQ9UMX1 484 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 TIMM13Q9Y5L4 95 aaPredicted RBP13.01□□□□□ -0.33
RNF4-201ENST00000314289 KPNA7A9QM74 516 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 GBP1P32455 592 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 EIF3BP55884 814 aaKnown RBP13.01□□□□□ -0.33
RNF4-201ENST00000314289 SNCBQ16143 134 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 CYB5D1Q6P9G0 228 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 C1orf228Q6PIY5 440 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 ALKAL1Q6UXT8 129 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 HOOK3Q86VS8 718 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 SMG8Q8ND04 991 aaKnown RBP13.01□□□□□ -0.33
RNF4-201ENST00000314289 USP6NLQ92738 828 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 SEC16BQ96JE7 1060 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 RBM15Q96T37 977 aaKnown RBP eCLIP13.01□□□□□ -0.33
RNF4-201ENST00000314289 HOMER3Q9NSC5 361 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 DDX56Q9NY93 547 aaKnown RBP13.01□□□□□ -0.33
RNF4-201ENST00000314289 NINJ2Q9NZG7 142 aa13.01□□□□□ -0.33
RNF4-201ENST00000314289 ABT1Q9ULW3 272 aaKnown RBP13.01□□□□□ -0.33
RNF4-201ENST00000314289 HAS3O00219 553 aa13□□□□□ -0.33
RNF4-201ENST00000314289 CLDN5O00501 218 aa13□□□□□ -0.33
RNF4-201ENST00000314289 PAPSS1O43252 624 aaPredicted RBP13□□□□□ -0.33
RNF4-201ENST00000314289 TRUB2O95900 331 aaKnown RBP13□□□□□ -0.33
RNF4-201ENST00000314289 KRT7P08729 469 aa13□□□□□ -0.33
RNF4-201ENST00000314289 GPD1P21695 349 aa13□□□□□ -0.33
RNF4-201ENST00000314289 GNL1P36915 607 aaPredicted RBP13□□□□□ -0.33
RNF4-201ENST00000314289 VCPP55072 806 aaKnown RBP13□□□□□ -0.33
RNF4-201ENST00000314289 AUHQ13825 339 aaKnown RBP13□□□□□ -0.33
RNF4-201ENST00000314289 CCDC14Q49A88 953 aa13□□□□□ -0.33
RNF4-201ENST00000314289 PPP6R3Q5H9R7 873 aaPredicted RBP13□□□□□ -0.33
RNF4-201ENST00000314289 CPLX4Q7Z7G2 160 aa13□□□□□ -0.33
RNF4-201ENST00000314289 FAM228AQ86W67 206 aa13□□□□□ -0.33
RNF4-201ENST00000314289 PARP9Q8IXQ6 854 aa13□□□□□ -0.33
RNF4-201ENST00000314289 CACNA2D3Q8IZS8 1091 aa13□□□□□ -0.33
RNF4-201ENST00000314289 ALLCQ8N6M5 410 aa13□□□□□ -0.33
RNF4-201ENST00000314289 FAM71DQ8N9W8 422 aa13□□□□□ -0.33
RNF4-201ENST00000314289 NETO2Q8NC67 525 aa13□□□□□ -0.33
RNF4-201ENST00000314289 MGARPQ8TDB4 240 aa13□□□□□ -0.33
RNF4-201ENST00000314289 SLC2A14Q8TDB8 520 aa13□□□□□ -0.33
RNF4-201ENST00000314289 KBTBD7Q8WVZ9 684 aa13□□□□□ -0.33
RNF4-201ENST00000314289 APBA2Q99767 749 aa13□□□□□ -0.33
RNF4-201ENST00000314289 PLEKHA5Q9HAU0 1116 aa13□□□□□ -0.33
RNF4-201ENST00000314289 SAYSD1Q9NPB0 183 aa13□□□□□ -0.33
RNF4-201ENST00000314289 WDR35Q9P2L0 1181 aa13□□□□□ -0.33
RNF4-201ENST00000314289 HESX1Q9UBX0 185 aa13□□□□□ -0.33
RNF4-201ENST00000314289 SYNJ2BP-COX16A0A087WUM0 186 aa13□□□□□ -0.33
RNF4-201ENST00000314289 C2CD4BA6NLJ0 364 aa13□□□□□ -0.33
RNF4-201ENST00000314289 TRAPPC3O43617 180 aa13□□□□□ -0.33
RNF4-201ENST00000314289 ZNF143P52747 638 aaPredicted RBP13□□□□□ -0.33
RNF4-201ENST00000314289 CAP1Q01518 475 aa13□□□□□ -0.33
RNF4-201ENST00000314289 OASLQ15646 514 aaKnown RBP13□□□□□ -0.33
RNF4-201ENST00000314289 CA9Q16790 459 aa13□□□□□ -0.33
RNF4-201ENST00000314289 NBPF20Q3BBV1 942 aa13□□□□□ -0.33
RNF4-201ENST00000314289 AGBL2Q5U5Z8 902 aa13□□□□□ -0.33
RNF4-201ENST00000314289 EMC10Q5UCC4 262 aa13□□□□□ -0.33
RNF4-201ENST00000314289 UNC45BQ8IWX7 931 aa13□□□□□ -0.33
RNF4-201ENST00000314289 FAM172AQ8WUF8 416 aa13□□□□□ -0.33
RNF4-201ENST00000314289 TRIB2Q92519 343 aa13□□□□□ -0.33
RNF4-201ENST00000314289 COX16Q9P0S2 106 aa13□□□□□ -0.33
RNF4-201ENST00000314289 CNTN3Q9P232 1028 aa13□□□□□ -0.33
RNF4-201ENST00000314289 TTC4O95801 387 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 GABRB2P47870 512 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 IFNAR2P48551 515 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 LRRC14Q15048 493 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 PAN2Q504Q3 1202 aaKnown RBP12.99□□□□□ -0.33
RNF4-201ENST00000314289 ANKRD20A8PQ5CZ79 823 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 ANKMY2Q8IV38 441 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 ASNSD1Q9NWL6 643 aa12.99□□□□□ -0.33
RNF4-201ENST00000314289 UBQLN1Q9UMX0 589 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms