RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.34□□□□□ -2.2
CEP290-201ENST00000309041 RIPK3Q9Y572 518 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 DGKBQ9Y6T7 804 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 PDS5AQ29RF7 1337 aaKnown RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 STRCQ7RTU9 1775 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 FAM230AA0A1W2PPH8 454 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 CLCA1A8K7I4 914 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 H7BY64 318 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 TADA3O75528 432 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 UPP2O95045 317 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 DNTTP04053 509 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 CT47B1P0C2W7 299 aaPredicted RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 USP17L7P0C7H9 530 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 TRIM27P14373 513 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 FBLP22087 321 aaKnown RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 FGFR4P22455 802 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 ADH7P40394 386 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 ADKP55263 362 aaKnown RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 CLDN18P56856 261 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 ACTR2P61160 394 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 SCARF1Q14162 830 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 LPIN1Q14693 890 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 GPR162Q16538 588 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 PRSS36Q5K4E3 855 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 ZNF468Q5VIY5 522 aaPredicted RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 CDCP2Q5VXM1 449 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 CES4AQ5XG92 561 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 IRGCQ6NXR0 463 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 C11orf74Q86VG3 221 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 PAQR7Q86WK9 346 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 RIMKLAQ8IXN7 391 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 MEIOBQ8N635 442 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 APCDD1LQ8NCL9 501 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 C11orf65Q8NCR3 313 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 OR52K1Q8NGK4 314 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 SPPL3Q8TCT6 385 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 APPBP2Q92624 585 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 CRBNQ96SW2 442 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 RBM4Q9BWF3 364 aaKnown RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 PACSIN1Q9BY11 444 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 XPO4Q9C0E2 1151 aaKnown RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 RAB17Q9H0T7 212 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 PDCL3Q9H2J4 239 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 UBQLN4Q9NRR5 601 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 MTMR10Q9NXD2 777 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 BARHL2Q9NY43 387 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 LRFN2Q9ULH4 789 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 X6R8D5 127 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 USP6P35125 1406 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 RALGAPBQ86X10 1494 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 A0A0A6YYJ9 748 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 C17orf102A2RUQ5 167 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 FAM221AA4D161 298 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 GSAPA4D1B5 854 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 A6NDN8 102 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 B4DXG7 233 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 TOR1AO14656 332 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 SLC30A4O14863 429 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 CTAG2O75638 210 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 GFPT2O94808 682 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 MT-ND3P03897 115 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 ASLP04424 464 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 SERPINA5P05154 406 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 PTGS1P23219 599 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 PPP2R1BP30154 601 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 IARSP41252 1262 aaKnown RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 EFNA3P52797 238 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 HSD17B7P56937 341 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 BCAR1P56945 870 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 GMFBP60983 142 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 HMGN5P82970 282 aaKnown RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 ROR1Q01973 937 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 TARDBPQ13148 414 aaKnown RBP eCLIP1.34□□□□□ -2.2
CEP290-201ENST00000309041 FZD5Q13467 585 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 ACAP2Q15057 778 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 TRNP1Q6NT89 227 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 MYLK4Q86YV6 388 aaPredicted RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 ZDHHC13Q8IUH4 622 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 APLFQ8IW19 511 aaPredicted RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 CCDC60Q8IWA6 550 aaPredicted RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 CCDC33Q8N5R6 958 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 MFSD2AQ8NA29 543 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 AGBL5Q8NDL9 886 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 PIK3C3Q8NEB9 887 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 OR6K3Q8NGY3 331 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 PPP1R13LQ8WUF5 828 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 SCAMP4Q969E2 229 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 FATE1Q969F0 183 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 GCC1Q96CN9 775 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 TRIM11Q96F44 468 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 MGLLQ99685 303 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 SYT17Q9BSW7 474 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 OSBPL10Q9BXB5 764 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 ABCG4Q9H172 646 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 TSPAN10Q9H1Z9 355 aaPredicted RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 RABEP2Q9H5N1 569 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 MTMR4Q9NYA4 1195 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 NOB1Q9ULX3 412 aaKnown RBP1.34□□□□□ -2.2
CEP290-201ENST00000309041 HS3ST4Q9Y661 456 aa1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms