RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 ZCWPW1Q9H0M4 648 aa17.33■□□□□ 0.36
SSH3-201ENST00000308127 RAB6BQ9NRW1 208 aa17.33■□□□□ 0.36
SSH3-201ENST00000308127 NFASCO94856 1347 aa17.33■□□□□ 0.36
SSH3-201ENST00000308127 ZNF646O15015 1829 aaPredicted RBP17.32■□□□□ 0.36
SSH3-201ENST00000308127 B2RBV5 119 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 OATP04181 439 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 DLDP09622 509 aaKnown RBP17.32■□□□□ 0.36
SSH3-201ENST00000308127 ALDH18A1P54886 795 aaKnown RBP17.32■□□□□ 0.36
SSH3-201ENST00000308127 TMEM132BQ14DG7 1078 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 RASA2Q15283 850 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 ENDOVQ8N8Q3 282 aaKnown RBP17.32■□□□□ 0.36
SSH3-201ENST00000308127 TRAPPC12Q8WVT3 735 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 FAF2Q96CS3 445 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 ZNF333Q96JL9 665 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 PEBP4Q96S96 227 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 IQCGQ9H095 443 aaKnown RBP17.32■□□□□ 0.36
SSH3-201ENST00000308127 WDR81Q562E7 1941 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 B4GALT5O43286 388 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 TBC1D12O60347 775 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 SERPINB4P48594 390 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 NEK3P51956 506 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 MCCD1P59942 119 aaPredicted RBP17.32■□□□□ 0.36
SSH3-201ENST00000308127 CDK16Q00536 496 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 CXCL9Q07325 125 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 LRRC36Q1X8D7 754 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 KLHL38Q2WGJ6 581 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 SCYL2Q6P3W7 929 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 CEP128Q6ZU80 1094 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 LPAR1Q92633 364 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 SRPK1Q96SB4 655 aaKnown RBP17.32■□□□□ 0.36
SSH3-201ENST00000308127 MAGEB5Q9BZ81 275 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 NIF3L1Q9GZT8 377 aa17.32■□□□□ 0.36
SSH3-201ENST00000308127 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.32■□□□□ 0.36
SSH3-201ENST00000308127 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.32■□□□□ 0.36
SSH3-201ENST00000308127 F7P08709 466 aaPredicted RBP17.31■□□□□ 0.36
SSH3-201ENST00000308127 PGM1P36871 562 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 CDH6P55285 790 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 ZNF200P98182 395 aaPredicted RBP17.31■□□□□ 0.36
SSH3-201ENST00000308127 KLC1Q07866 573 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 SGSM1Q2NKQ1 1148 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 CCDC62Q6P9F0 684 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 STMN2Q93045 179 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 OXNAD1Q96HP4 312 aaPredicted RBP17.31■□□□□ 0.36
SSH3-201ENST00000308127 MMP19Q99542 508 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 MCF2LO15068 1137 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 PSMG1O95456 288 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 BAG2O95816 211 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 ZCCHC18P0CG32 403 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 CHRM1P11229 460 aaPredicted RBP17.31■□□□□ 0.36
SSH3-201ENST00000308127 TMPRSS15P98073 1019 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 HSF5Q4G112 596 aaPredicted RBP17.31■□□□□ 0.36
SSH3-201ENST00000308127 UNC5BQ8IZJ1 945 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 SKA1Q96BD8 255 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 TTC1Q99614 292 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 C20orf27Q9GZN8 174 aa17.31■□□□□ 0.36
SSH3-201ENST00000308127 COPEO14579 308 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 GNAT1P11488 350 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 ETV4P43268 484 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 BST1Q10588 318 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 PRKD1Q15139 912 aaPredicted RBP17.3■□□□□ 0.36
SSH3-201ENST00000308127 MROH9Q5TGP6 573 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 ISLR2Q6UXK2 745 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 LRRC74BQ6ZQY2 392 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 BBS12Q6ZW61 710 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 EFCAB3Q8N7B9 438 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 SMYD3Q9H7B4 428 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 MYOZ2Q9NPC6 264 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 ARHGEF4Q9NR80 690 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 PCMTD2Q9NV79 361 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 DDX56Q9NY93 547 aaKnown RBP17.3■□□□□ 0.36
SSH3-201ENST00000308127 CNTN6Q9UQ52 1028 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 STYXL1Q9Y6J8 313 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 ADGRA2Q96PE1 1338 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 VHLP40337 213 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 UBAP2LQ14157 1087 aaKnown RBP17.3■□□□□ 0.36
SSH3-201ENST00000308127 RNF149Q8NC42 400 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 DHRS4Q9BTZ2 278 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 SMYD2Q9NRG4 433 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 STOML1Q9UBI4 398 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 LNPEPQ9UIQ6 1025 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 MAD1L1Q9Y6D9 718 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 TRAFD1O14545 582 aaPredicted RBP17.3■□□□□ 0.36
SSH3-201ENST00000308127 PLSCR1O15162 318 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 KCNN4O15554 427 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 APRTP07741 180 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 SP100P23497 879 aaPredicted RBP17.3■□□□□ 0.36
SSH3-201ENST00000308127 NAMPTP43490 491 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 ASPAP45381 313 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 RGS7P49802 495 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 SLC18A1P54219 525 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 CHI3L2Q15782 390 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 FAM102AQ5T9C2 384 aaPredicted RBP17.3■□□□□ 0.36
SSH3-201ENST00000308127 LRRC38Q5VT99 294 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 SLFN12LQ6IEE8 588 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 TRMT10BQ6PF06 316 aaKnown RBP17.3■□□□□ 0.36
SSH3-201ENST00000308127 TEX9Q8N6V9 391 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 UBR7Q8N806 425 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 FBXO41Q8TF61 875 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 TEKT4Q8WW24 435 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 USP6NLQ92738 828 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms