RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 JOSD2Q8TAC2 188 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 PARVAQ9NVD7 372 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 LOC285556D6RIA3 1793 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 UBE4BO95155 1302 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 CYP1A2P05177 515 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 OSBPP22059 807 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 PGGT1BP53609 377 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 HMGCS2P54868 508 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 MRPS9P82933 396 aaKnown RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 CUL2Q13617 745 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 PTK6Q13882 451 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 C15orf59Q2T9L4 293 aaPredicted RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 ACSBG2Q5FVE4 666 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 PTAR1Q7Z6K3 402 aaPredicted RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 UNC5BQ8IZJ1 945 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 NME8Q8N427 588 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 SNRNP27Q8WVK2 155 aaKnown RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 PSPC1Q8WXF1 523 aaKnown RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 ZNF516Q92618 1163 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 NSL1Q96IY1 281 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 FAM81BQ96LP2 452 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 CADM1Q9BY67 442 aaKnown RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 ANLNQ9NQW6 1124 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 HOXC10Q9NYD6 342 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 PCDHA10Q9Y5I2 948 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 ADGRA3Q8IWK6 1321 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 PHIPQ8WWQ0 1821 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 CCDC22O60826 627 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 INHBEP58166 350 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 RAB6CQ53S08 254 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 CLNKQ7Z7G1 428 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 TMEM161BQ8NDZ6 487 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 FAM149B1Q96BN6 582 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 MTBPQ96DY7 904 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 RAB6CQ9H0N0 254 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 EBF2Q9HAK2 575 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 DMAC2Q9NW81 257 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 RHBDL2Q9NX52 303 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 RIPK3Q9Y572 518 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 ANKRD12Q6UB98 2062 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 CEP350Q5VT06 3117 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 PEX1O43933 1283 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 PAPOLAP51003 745 aaKnown RBP15.21■□□□□ 0.03
PTPN9-201ENST00000306726 OPTNQ96CV9 577 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 PHF12Q96QT6 1004 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.21■□□□□ 0.03
PTPN9-201ENST00000306726 DNALI1O14645 258 aaPredicted RBP15.21■□□□□ 0.03
PTPN9-201ENST00000306726 EDF1O60869 148 aaKnown RBP15.21■□□□□ 0.03
PTPN9-201ENST00000306726 ZBED1O96006 694 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 MT-CO1P00395 513 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 NR3C2P08235 984 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 TRIP10Q15642 601 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 CCNG2Q16589 344 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 HADHQ16836 314 aaKnown RBP15.21■□□□□ 0.03
PTPN9-201ENST00000306726 LPCAT4Q643R3 524 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 TLDC1Q6P9B6 456 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 EIF1ADQ8N9N8 165 aaKnown RBP15.21■□□□□ 0.03
PTPN9-201ENST00000306726 CEP70Q8NHQ1 597 aa15.21■□□□□ 0.03
PTPN9-201ENST00000306726 ZNF483Q8TF39 744 aaPredicted RBP15.21■□□□□ 0.03
PTPN9-201ENST00000306726 M0QYV0 167 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 DNAJC6O75061 913 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 LINGO3P0C6S8 592 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 PTPN4P29074 926 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 HOXA7P31268 230 aaPredicted RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 BPIFB4P59827 614 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 COG7P83436 770 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 ZNF699Q32M78 642 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 OLFML2BQ68BL8 750 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 TEX9Q8N6V9 391 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 RNF149Q8NC42 400 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 TMEM35BQ8NCS4 154 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 SHKBP1Q8TBC3 707 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 RAB3IL1Q8TBN0 382 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 APOL2Q9BQE5 337 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 DDX18Q9NVP1 670 aaKnown RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 PTPRJQ12913 1337 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 MANSC4A6NHS7 340 aaPredicted RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 TBX10O75333 385 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 SORBS2O94875 1100 aaKnown RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 IFRD2Q12894 506 aaPredicted RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 VWA5B1Q5TIE3 1220 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 DENND5BQ6ZUT9 1274 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 GSTCDQ8NEC7 633 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 SYTL5Q8TDW5 730 aaPredicted RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 RBM41Q96IZ5 413 aaKnown RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 APOBEC3GQ9HC16 384 aaKnown RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 BATF3Q9NR55 127 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 ZC3H7BQ9UGR2 993 aaKnown RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 TLL2Q9Y6L7 1015 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 TMEM88BA6NKF7 163 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 NOP56O00567 594 aaKnown RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 ANXA13P27216 316 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 IYDQ6PHW0 289 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 CCDC60Q8IWA6 550 aaPredicted RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 DEPDC1BQ8WUY9 529 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 OTUD5Q96G74 571 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 RPAP3Q9H6T3 665 aaPredicted RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 AGO4Q9HCK5 861 aaKnown RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 NDE1Q9NXR1 346 aa15.2■□□□□ 0.02
PTPN9-201ENST00000306726 IP6K2Q9UHH9 426 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms