RNA–Protein interactions for RNA: ENST00000300954.9

PCSK4-201, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK4, Length 2,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-201ENST00000300954 CALN1Q9BXU9 219 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 SLC4A5Q9BY07 1137 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 MIS12Q9H081 205 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 NSRP1Q9H0G5 558 aaKnown RBP17.11■□□□□ 0.33
PCSK4-201ENST00000300954 SAMD15Q9P1V8 674 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 CLUHO75153 1309 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 TCRBV7S3A2A0A539 114 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 DPYSL4O14531 572 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 DPYSL3Q14195 570 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 RASA2Q15283 850 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 HIF1AQ16665 826 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 ANKS4BQ8N8V4 417 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 SLC35F5Q8WV83 523 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.11■□□□□ 0.33
PCSK4-201ENST00000300954 TUBGCP4Q9UGJ1 667 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 GJD2Q9UKL4 321 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 SNX9Q9Y5X1 595 aa17.11■□□□□ 0.33
PCSK4-201ENST00000300954 GRAP2O75791 330 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 RBP3P10745 1247 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 RGS7P49802 495 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 CDH6P55285 790 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 NR1H3Q13133 447 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 NOMO1Q15155 1222 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 NPNTQ6UXI9 565 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 PLEKHH3Q7Z736 793 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 TMEM110Q86TL2 294 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 ACOT1Q86TX2 421 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 FAM71DQ8N9W8 422 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
PCSK4-201ENST00000300954 VPS37BQ9H9H4 285 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 UBN1Q9NPG3 1134 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 PDCD11Q14690 1871 aaKnown RBP17.1■□□□□ 0.33
PCSK4-201ENST00000300954 IL4RP24394 825 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 ARHGEF18Q6ZSZ5 1173 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 PNMA8AQ86V59 439 aaPredicted RBP17.1■□□□□ 0.33
PCSK4-201ENST00000300954 ANKMY2Q8IV38 441 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 GDAP1Q8TB36 358 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
PCSK4-201ENST00000300954 PTPN18Q99952 460 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 FGFR1OP2Q9NVK5 253 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 RABGEF1Q9UJ41 708 aa17.1■□□□□ 0.33
PCSK4-201ENST00000300954 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 POC1B-GALNT4F8VUJ3 575 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 TMEM63AO94886 807 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 ARL4CP56559 192 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 ADCY1Q08828 1119 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 PKN2Q16513 984 aaKnown RBP17.09■□□□□ 0.33
PCSK4-201ENST00000300954 EFHC2Q5JST6 749 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 LRRC52Q8N7C0 313 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 DENND1AQ8TEH3 1009 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 MAGEB18Q96M61 343 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 RNF157Q96PX1 679 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 FAM49AQ9H0Q0 323 aaPredicted RBP17.09■□□□□ 0.33
PCSK4-201ENST00000300954 PPCSQ9HAB8 311 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 HES2Q9Y543 173 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 ZNF236Q9UL36 1845 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 MBLAC1A4D2B0 266 aaPredicted RBP17.09■□□□□ 0.33
PCSK4-201ENST00000300954 A6NJR5 290 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 MCF2LO15068 1137 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 SETSIPP0DME0 302 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 SCTRP47872 440 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 NRLP54845 237 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 WDR4P57081 412 aaKnown RBP17.09■□□□□ 0.33
PCSK4-201ENST00000300954 SLC6A3Q01959 620 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 SF3A3Q12874 501 aaKnown RBP eCLIP17.09■□□□□ 0.33
PCSK4-201ENST00000300954 HIC1Q14526 733 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 FAM110CQ1W6H9 321 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 CAPN12Q6ZSI9 719 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 CATSPER4Q7RTX7 472 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 USP6NLQ92738 828 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 CNTN3Q9P232 1028 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 SLC24A2Q9UI40 661 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 GINS2Q9Y248 185 aa17.09■□□□□ 0.33
PCSK4-201ENST00000300954 SMAPO00193 183 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 PRPSAP2O60256 369 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 SMIM10L2AP0DMW4 78 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 SMIM10L2BP0DMW5 78 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 SLC18A1P54219 525 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 CDC42EP1Q00587 391 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 CDO1Q16878 200 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 SOWAHAQ2M3V2 549 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 PPP1R21Q6ZMI0 780 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 PPP1R13LQ8WUF5 828 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 SGSM3Q96HU1 749 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 OSMRQ99650 979 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 FAM49BQ9NUQ9 324 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 NKIRAS1Q9NYS0 192 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 FETUBQ9UGM5 382 aa17.08■□□□□ 0.33
PCSK4-201ENST00000300954 GNEQ9Y223 722 aaKnown RBP17.08■□□□□ 0.33
PCSK4-201ENST00000300954 NRCAMQ92823 1304 aa17.08■□□□□ 0.32
PCSK4-201ENST00000300954 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.08■□□□□ 0.32
PCSK4-201ENST00000300954 SMIM35A0A1B0GVV1 85 aa17.08■□□□□ 0.32
PCSK4-201ENST00000300954 FAM47DPA6NHR8 397 aa17.08■□□□□ 0.32
PCSK4-201ENST00000300954 PRPF4O43172 522 aaKnown RBP eCLIP17.08■□□□□ 0.32
PCSK4-201ENST00000300954 PAPSS1O43252 624 aaPredicted RBP17.08■□□□□ 0.32
PCSK4-201ENST00000300954 F2P00734 622 aa17.08■□□□□ 0.32
PCSK4-201ENST00000300954 STIP1P31948 543 aaKnown RBP17.08■□□□□ 0.32
PCSK4-201ENST00000300954 STX2P32856 288 aa17.08■□□□□ 0.32
PCSK4-201ENST00000300954 FAM47CQ5HY64 1035 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms