RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 FAM171BQ6P995 826 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 PAQR9Q6ZVX9 377 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 ANKS3Q6ZW76 656 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 DPH6Q7L8W6 267 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 TMC7Q7Z402 723 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 RBM23Q86U06 439 aaKnown RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 ETFBKMTQ8IXQ9 262 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 GPR65Q8IYL9 337 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 TMEM86AQ8N2M4 240 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 PGBD3Q8N328 593 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 SLC4A11Q8NBS3 891 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 SPATA18Q8TC71 538 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 HSH2DQ96JZ2 352 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 NT5C1BQ96P26 610 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 MMS19Q96T76 1030 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 RHOBTB2Q9BYZ6 727 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 ZCCHC2Q9C0B9 1178 aaKnown RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 XPO4Q9C0E2 1151 aaKnown RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 ZCWPW1Q9H0M4 648 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 NGRNQ9NPE2 291 aaKnown RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 ACP6Q9NPH0 428 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 C11orf16Q9NQ32 467 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 PLCB1Q9NQ66 1216 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 MRPL17Q9NRX2 175 aaKnown RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 CISHQ9NSE2 258 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 DDX43Q9NXZ2 648 aaKnown RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 LMCD1Q9NZU5 365 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 IFNKQ9P0W0 207 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 APEX2Q9UBZ4 518 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 CNTN6Q9UQ52 1028 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 STXBP5LQ9Y2K9 1186 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 PCDHGC4Q9Y5F7 938 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 MIA3Q5JRA6 1907 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 FSD2A1L4K1 749 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 MTMR11A4FU01 709 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 SOWAHDA6NJG2 315 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 GOLGA6L19H0YKK7 550 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 CLDN5O00501 218 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 PES1O00541 588 aaKnown RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 TGM5O43548 720 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 TBX10O75333 385 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 SOAT2O75908 522 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 PAPLNO95428 1278 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 FAM163BP0C2L3 166 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 SPATA31D3P0C874 917 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 UCHL3P15374 230 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 BRD2P25440 801 aaKnown RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 GRNP28799 593 aaKnown RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 GNL1P36915 607 aaPredicted RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 NDUFV1P49821 464 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 UBASH3AP57075 661 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 GCNT1Q02742 428 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 DLX2Q07687 328 aaPredicted RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 RAB33AQ14088 237 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 PTPROQ16827 1216 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 SLC39A12Q504Y0 691 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 MDH1BQ5I0G3 518 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 PDE12Q6L8Q7 609 aaKnown RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 ZNF280DQ6N043 979 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 SARM1Q6SZW1 724 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 SPATA31D4Q6ZUB0 917 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 BTLAQ7Z6A9 289 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 ACOT1Q86TX2 421 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 PALB2Q86YC2 1186 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 PPM1KQ8N3J5 372 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 C12orf29Q8N999 325 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 B3GALNT2Q8NCR0 500 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 OR6B3Q8NGW1 331 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 TFAP2BQ92481 460 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 SHC3Q92529 594 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 IFT43Q96FT9 208 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 FAXDC2Q96IV6 333 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 SYT15Q9BQS2 421 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 ACBD6Q9BR61 282 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 B3GNT5Q9BYG0 378 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 IMPG2Q9BZV3 1241 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 NSUN3Q9H649 340 aaKnown RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 CYP3A43Q9HB55 503 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 UBE2TQ9NPD8 197 aaPredicted RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 FAM207AQ9NSI2 230 aaPredicted RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 CLEC1BQ9P126 229 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 PUF60Q9UHX1 559 aaKnown RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 CDH22Q9UJ99 828 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 FBXW11Q9UKB1 542 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 DNAJC12Q9UKB3 198 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 DSEQ9UL01 958 aa6.28□□□□□ -1.4
SSX3-201ENST00000298396 BARX2Q9UMQ3 279 aaPredicted RBP6.28□□□□□ -1.4
SSX3-201ENST00000298396 A0A1W2PQC6 194 aa6.27□□□□□ -1.41
SSX3-201ENST00000298396 OR6C75A6NL08 312 aa6.27□□□□□ -1.41
SSX3-201ENST00000298396 A8MXQ7 604 aa6.27□□□□□ -1.41
SSX3-201ENST00000298396 F8VZ95 297 aa6.27□□□□□ -1.41
SSX3-201ENST00000298396 H7C4K7 107 aa6.27□□□□□ -1.41
SSX3-201ENST00000298396 FOXN3O00409 490 aaPredicted RBP6.27□□□□□ -1.41
SSX3-201ENST00000298396 BNIP3LO60238 219 aa6.27□□□□□ -1.41
SSX3-201ENST00000298396 BEST1O76090 585 aa6.27□□□□□ -1.41
SSX3-201ENST00000298396 SERPINC1P01008 464 aa6.27□□□□□ -1.41
SSX3-201ENST00000298396 CCDC130P13994 396 aa6.27□□□□□ -1.41
SSX3-201ENST00000298396 FOSL2P15408 326 aa6.27□□□□□ -1.41
SSX3-201ENST00000298396 PTPN1P18031 435 aaKnown RBP6.27□□□□□ -1.41
SSX3-201ENST00000298396 TBXAS1P24557 533 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms