RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 FAM126BQ8IXS8 530 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 CLEC4CQ8WTT0 213 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 ART4Q93070 314 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 SLC4A5Q9BY07 1137 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 MIS12Q9H081 205 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 RGS18Q9NS28 235 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 C9IYK1 514 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 DNM1LO00429 736 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 BRCC3P46736 316 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 DSTYKQ6XUX3 929 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 LRRC8DQ7L1W4 858 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 FNIP1Q8TF40 1166 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 PGBD4Q96DM1 585 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 RBM41Q96IZ5 413 aaKnown RBP22.41■■□□□ 1.18
SOX17-201ENST00000297316 CCDC114Q96M63 670 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 RNF208Q9H0X6 261 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 ZWILCHQ9H900 591 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 DDX43Q9NXZ2 648 aaKnown RBP22.41■■□□□ 1.18
SOX17-201ENST00000297316 NEU2Q9Y3R4 380 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 SCN5AQ14524 2016 aa22.41■■□□□ 1.18
SOX17-201ENST00000297316 C3orf70A6NLC5 250 aaPredicted RBP22.4■■□□□ 1.18
SOX17-201ENST00000297316 GABRDO14764 452 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 PAPSS1O43252 624 aaPredicted RBP22.4■■□□□ 1.18
SOX17-201ENST00000297316 ITGB1P05556 798 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 IVDP26440 423 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 RABGGTBP53611 331 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 CCNG2Q16589 344 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 ZSCAN26Q16670 478 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 LRIG3Q6UXM1 1119 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 FUKQ8N0W3 1084 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 ANKRD52Q8NB46 1076 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 FAM76AQ8TAV0 307 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 LRRD1A4D1F6 860 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 NBNO60934 754 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 B3GAT3O94766 335 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 ATN1P54259 1190 aaPredicted RBP22.4■■□□□ 1.18
SOX17-201ENST00000297316 PTK6Q13882 451 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 CD300LGQ6UXG3 332 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 BEGAINQ9BUH8 593 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 LCMT1Q9UIC8 334 aa22.4■■□□□ 1.18
SOX17-201ENST00000297316 hCG_1818297A0A087WSY0 165 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 BEST1O76090 585 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 CCL5P13501 91 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 PTPN1P18031 435 aaKnown RBP22.39■■□□□ 1.17
SOX17-201ENST00000297316 CDKN2BP42772 138 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 MTMR3Q13615 1198 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 C15orf59Q2T9L4 293 aaPredicted RBP22.39■■□□□ 1.17
SOX17-201ENST00000297316 DNAJC21Q5F1R6 531 aaKnown RBP22.39■■□□□ 1.17
SOX17-201ENST00000297316 MDH1BQ5I0G3 518 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 OLFML1Q6UWY5 402 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 PAQR9Q6ZVX9 377 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 TMEM110Q86TL2 294 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 KHSRPQ92945 711 aaKnown RBP eCLIP22.39■■□□□ 1.17
SOX17-201ENST00000297316 TNIP3Q96KP6 325 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 CRTAC1Q9NQ79 661 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 ASIC3Q9UHC3 531 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 PQBP1O60828 265 aaKnown RBP22.39■■□□□ 1.17
SOX17-201ENST00000297316 LCP1P13796 627 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 VPS41P49754 854 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 BCAT1P54687 386 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 BST2Q10589 180 aaKnown RBP22.39■■□□□ 1.17
SOX17-201ENST00000297316 GRIK3Q13003 919 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 CLLU1OSQ5K130 101 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 ATL2Q8NHH9 583 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 TMBIM4Q9HC24 238 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 PCSK1NQ9UHG2 260 aa22.39■■□□□ 1.17
SOX17-201ENST00000297316 TSC2P49815 1807 aa22.38■■□□□ 1.17
SOX17-201ENST00000297316 SELPP16109 830 aa22.38■■□□□ 1.17
SOX17-201ENST00000297316 RPL9P32969 192 aaKnown RBP22.38■■□□□ 1.17
SOX17-201ENST00000297316 PMS2P54278 862 aa22.38■■□□□ 1.17
SOX17-201ENST00000297316 SLC24A5Q71RS6 500 aa22.38■■□□□ 1.17
SOX17-201ENST00000297316 ZNF280BQ86YH2 543 aa22.38■■□□□ 1.17
SOX17-201ENST00000297316 RXFP2Q8WXD0 754 aa22.38■■□□□ 1.17
SOX17-201ENST00000297316 HAUS1Q96CS2 278 aa22.38■■□□□ 1.17
SOX17-201ENST00000297316 DNPEPQ9ULA0 475 aa22.38■■□□□ 1.17
SOX17-201ENST00000297316 C2CD4BA6NLJ0 364 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 CD48P09326 243 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 CDO1Q16878 200 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 POLNQ7Z5Q5 900 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 NDRG1Q92597 394 aaKnown RBP22.37■■□□□ 1.17
SOX17-201ENST00000297316 CFAP57Q96MR6 1250 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 DDX56Q9NY93 547 aaKnown RBP22.37■■□□□ 1.17
SOX17-201ENST00000297316 MYBPHLA2RUH7 354 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 LIASO43766 372 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 SHBGP04278 402 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 SETSIPP0DME0 302 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 PDGFRAP16234 1089 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 TUSC3Q13454 348 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 TCTN1Q2MV58 587 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 GLIS1Q8NBF1 620 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 DBF4BQ8NFT6 615 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 SEMA4AQ9H3S1 761 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 AAASQ9NRG9 546 aa22.37■■□□□ 1.17
SOX17-201ENST00000297316 DDHD2O94830 711 aa22.36■■□□□ 1.17
SOX17-201ENST00000297316 SKIP12755 728 aa22.36■■□□□ 1.17
SOX17-201ENST00000297316 MIPP30301 263 aa22.36■■□□□ 1.17
SOX17-201ENST00000297316 PTPN7P35236 360 aa22.36■■□□□ 1.17
SOX17-201ENST00000297316 TFDP3Q5H9I0 405 aa22.36■■□□□ 1.17
SOX17-201ENST00000297316 RHBDF2Q6PJF5 856 aa22.36■■□□□ 1.17
SOX17-201ENST00000297316 GRK7Q8WTQ7 553 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms