RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ABCG2Q9UNQ0 655 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 NAALADL1Q9UQQ1 740 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 NEU2Q9Y3R4 380 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 PCDHB6Q9Y5E3 794 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 SNAPC4Q5SXM2 1469 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 CFAP74Q9C0B2 1584 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 E5RI56 91 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 PRR23D1E9PI22 279 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 C2CD2LO14523 706 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 ZBTB39O15060 712 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 SYNCRIPO60506 623 aaKnown RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 TPST1O60507 370 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 FGAP02671 866 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 PRR23D2P0DMB1 279 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 SNX31Q8N9S9 440 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 ZNF317Q96PQ6 595 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 CSRNP1Q96S65 589 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 HEMGNQ9BXL5 484 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 FOXP1Q9H334 677 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-201ENST00000296215 GOLPH3Q9H4A6 298 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 ARL8BQ9NVJ2 186 aa12.15□□□□□ -0.46
SNIP1-201ENST00000296215 RNASEH1O60930 286 aaKnown RBP12.15□□□□□ -0.47
SNIP1-201ENST00000296215 ACAT1P24752 427 aaKnown RBP12.15□□□□□ -0.47
SNIP1-201ENST00000296215 ZNF76P36508 570 aa12.15□□□□□ -0.47
SNIP1-201ENST00000296215 PTPN5P54829 565 aa12.15□□□□□ -0.47
SNIP1-201ENST00000296215 RAD51Q06609 339 aa12.15□□□□□ -0.47
SNIP1-201ENST00000296215 TRAF3Q13114 568 aa12.15□□□□□ -0.47
SNIP1-201ENST00000296215 POLD3Q15054 466 aaPredicted RBP12.15□□□□□ -0.47
SNIP1-201ENST00000296215 USF2Q15853 346 aaPredicted RBP12.15□□□□□ -0.47
SNIP1-201ENST00000296215 NFIL3Q16649 462 aa12.15□□□□□ -0.47
SNIP1-201ENST00000296215 CYP20A1Q6UW02 462 aa12.15□□□□□ -0.47
SNIP1-201ENST00000296215 RAVER1Q8IY67 606 aaKnown RBP12.15□□□□□ -0.47
SNIP1-201ENST00000296215 ZNF398Q8TD17 642 aa12.15□□□□□ -0.47
SNIP1-201ENST00000296215 SLC4A5Q9BY07 1137 aa12.15□□□□□ -0.47
SNIP1-201ENST00000296215 DGCR6LQ9BY27 220 aa12.15□□□□□ -0.47
SNIP1-201ENST00000296215 H3BUI4 141 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 FOXP2O15409 715 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 CRCPO75575 148 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 CD4P01730 458 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 EVI2BP34910 448 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 CYP4A11Q02928 519 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 DLG1Q12959 904 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 TRADDQ15628 312 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 CYP4A22Q5TCH4 519 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 LIN9Q5TKA1 542 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 IZUMO3Q5VZ72 239 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 BNC2Q6ZN30 1099 aaPredicted RBP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 Q6ZNX1 250 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 FRMD7Q6ZUT3 714 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 STOX1Q6ZVD7 989 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 TOM1L2Q6ZVM7 507 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 OR8H3Q8N146 312 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 ZNF75CPQ92670 426 aaPredicted RBP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 EDC3Q96F86 508 aaKnown RBP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 SENP7Q9BQF6 1050 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 IER2Q9BTL4 223 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 SLCO1B3Q9NPD5 702 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 DENND2AQ9ULE3 1009 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 V9GY48 417 aaPredicted RBP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 AATKQ6ZMQ8 1374 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 GGPS1O95749 300 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 PROCP04070 461 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 CYP1A2P05177 515 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 RASA1P20936 1047 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 NSFP46459 744 aaKnown RBP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 DNASE1L3Q13609 305 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 AKIRIN2Q53H80 203 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 PGM2L1Q6PCE3 622 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 ENKURQ8TC29 256 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 CDADC1Q9BWV3 514 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 CACNA2D2Q9NY47 1150 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 PCDHA12Q9UN75 941 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 FADS2P1A8MWK0 482 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 H7C2Y5 167 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 PLD2O14939 933 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 TOMM70O94826 608 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 MAP3K6O95382 1288 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 NUDT17P0C025 328 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 AQP5P55064 265 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 C21orf62-AS1Q17RA5 79 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 C6orf52Q5T4I8 152 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 PQLC1Q8N2U9 271 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 E2F7Q96AV8 911 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 RNF25Q96BH1 459 aaPredicted RBP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 ASIC4Q96FT7 647 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 BIRC8Q96P09 236 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 CDK5RAP1Q96SZ6 601 aaKnown RBP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 OSBPL11Q9BXB4 747 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 ALDH8A1Q9H2A2 487 aaPredicted RBP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 RAB20Q9NX57 234 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 NSMCE4AQ9NXX6 385 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 TMOD3Q9NYL9 352 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 KCNN3Q9UGI6 736 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 CHKBQ9Y259 395 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 KCNE2Q9Y6J6 123 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms