RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 KCNN4O15554 427 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 DKC1O60832 514 aaKnown RBP eCLIP15.34■□□□□ 0.05
CCNF-201ENST00000293968 DLDP09622 509 aaKnown RBP15.34■□□□□ 0.05
CCNF-201ENST00000293968 DPYSL3Q14195 570 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 KRT81Q14533 505 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 ATG16L1Q676U5 607 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 DENND1BQ6P3S1 775 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 KBTBD2Q8IY47 623 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 NAT8LQ8N9F0 302 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 SLC35B2Q8TB61 432 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 PYDC1Q8WXC3 89 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 RPL26L1Q9UNX3 145 aaKnown RBP15.34■□□□□ 0.05
CCNF-201ENST00000293968 PTGER2P43116 358 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 DSG1Q02413 1049 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 ZNF699Q32M78 642 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 DRICH1Q6PGQ1 229 aaPredicted RBP15.34■□□□□ 0.05
CCNF-201ENST00000293968 CDHR3Q6ZTQ4 885 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 RASSF3Q86WH2 238 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 TREML1Q86YW5 311 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 MFN1Q8IWA4 741 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 NDUFAF2Q8N183 169 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 EFCAB3Q8N7B9 438 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 TFAP2BQ92481 460 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 SKA1Q96BD8 255 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 WWP1Q9H0M0 922 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 KCNK13Q9HB14 408 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 RARBP10826 455 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 ANPEPP15144 967 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 KDELR1P24390 212 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 ACTR2P61160 394 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 OCRLQ01968 901 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 SLFN12LQ6IEE8 588 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 CGRRF1Q99675 332 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 WDR83Q9BRX9 315 aaKnown RBP15.33■□□□□ 0.05
CCNF-201ENST00000293968 TLE6Q9H808 572 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 C17orf75Q9HAS0 396 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 NRAPQ86VF7 1730 aa15.33■□□□□ 0.05
CCNF-201ENST00000293968 PRKD1Q15139 912 aaPredicted RBP15.33■□□□□ 0.04
CCNF-201ENST00000293968 C15orf39Q6ZRI6 1047 aa15.33■□□□□ 0.04
CCNF-201ENST00000293968 TMPRSS6Q8IU80 811 aa15.33■□□□□ 0.04
CCNF-201ENST00000293968 TRIM56Q9BRZ2 755 aaKnown RBP15.33■□□□□ 0.04
CCNF-201ENST00000293968 ZNF212Q9UDV6 495 aa15.33■□□□□ 0.04
CCNF-201ENST00000293968 FARP1Q9Y4F1 1045 aaPredicted RBP15.33■□□□□ 0.04
CCNF-201ENST00000293968 UGT1A9O60656 530 aa15.33■□□□□ 0.04
CCNF-201ENST00000293968 RAB27AP51159 221 aa15.33■□□□□ 0.04
CCNF-201ENST00000293968 UGT1A7Q9HAW7 530 aa15.33■□□□□ 0.04
CCNF-201ENST00000293968 UGT1A10Q9HAW8 530 aa15.33■□□□□ 0.04
CCNF-201ENST00000293968 UGT1A8Q9HAW9 530 aa15.33■□□□□ 0.04
CCNF-201ENST00000293968 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 PRR5-ARHGAP8B1AHC4 643 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 LRCH4O75427 683 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 ARHGAP8P85298 464 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 SLC25A3Q00325 362 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 SGSM1Q2NKQ1 1148 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 LRRC38Q5VT99 294 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 TTC39BQ5VTQ0 682 aaPredicted RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 RSPH3Q86UC2 560 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 ULK2Q8IYT8 1036 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 RNF217Q8TC41 542 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 USP6NLQ92738 828 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 ATG4CQ96DT6 458 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 NTPCRQ9BSD7 190 aaKnown RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 HAPLN2Q9GZV7 340 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 KRT82Q9NSB4 513 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCNF-201ENST00000293968 GPATCH2LQ9NWQ4 482 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 LOC100653049A0A140TA62 436 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 ABLIM1O14639 778 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 KRT34O76011 436 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 PDE5AO76074 875 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 TOP3BO95985 862 aaKnown RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 SNRPAP09012 282 aaKnown RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 HSPA1LP34931 641 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 PPP1R2P3Q6NXS1 205 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 GALNT15Q8N3T1 639 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 GSTCDQ8NEC7 633 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 PHACTR1Q9C0D0 580 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 WDR35Q9P2L0 1181 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 KDM4FA0A1W2PPD8 638 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 LDHAP00338 332 aaKnown RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 GSTA2P09210 222 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 NCF2P19878 526 aaPredicted RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 CDH8P55286 799 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 OR52E8Q6IFG1 317 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 SLC26A11Q86WA9 606 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 FAM136AQ96C01 138 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 GJD4Q96KN9 370 aaPredicted RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 RPAP3Q9H6T3 665 aaPredicted RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 ARHGAP28Q9P2N2 729 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 TAGLN3Q9UI15 199 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 POLIQ9UNA4 740 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 WNK3Q9BYP7 1800 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 A0A1B0GVG6 124 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 GSTT1P30711 240 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 PTPN20Q4JDL3 420 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 FAM102AQ5T9C2 384 aaPredicted RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 SNRNP48Q6IEG0 339 aaKnown RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 NIF3L1Q9GZT8 377 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms