RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MDH1BQ5I0G3 518 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 CASC4Q6P4E1 433 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 MAATS1Q7Z4T9 603 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 MCOLN2Q8IZK6 566 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 HASPINQ8TF76 798 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 NSMCE1Q8WV22 266 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 SLC35F5Q8WV83 523 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 MYLPFQ96A32 169 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 CYFIP2Q96F07 1278 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 SPATA17Q96L03 361 aa8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 ZNF830Q96NB3 372 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 TGS1Q96RS0 853 aaKnown RBP8.88□□□□□ -0.99
PTPDC1-201ENST00000288976 FBXO21O94952 628 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 MMP8P22894 467 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 ARHGAP25P42331 645 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 MAGEA1P43355 309 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 NDUFV1P49821 464 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 PSMD5Q16401 504 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 RAB41Q5JT25 222 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 C9orf50Q5SZB4 431 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 REXO1L1PQ8IX06 675 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 C1orf131Q8NDD1 294 aaKnown RBP8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 SPPL2BQ8TCT7 592 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 C8orf48Q96LL4 319 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 FAM204AQ9H8W3 233 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 HCSTQ9UBK5 93 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 TMEM265A0A087WTH1 108 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 FAM200BP0CF97 657 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 GPC5P78333 572 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 PDCLQ13371 301 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 PLD1Q13393 1074 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 ZNF268Q14587 947 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 RTP2Q5QGT7 225 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 TMEM173Q86WV6 379 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 ACRBPQ8NEB7 543 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 IPO4Q8TEX9 1081 aaKnown RBP8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 HDAC7Q8WUI4 952 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 RFFLQ8WZ73 363 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 IRGQQ8WZA9 623 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 PCED1BQ96HM7 432 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 PCDHB5Q9Y5E4 795 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 ABLIM3O94929 683 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 IGFBP6P24592 240 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 KIF5AQ12840 1032 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 DENND1BQ6P3S1 775 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 TMEM110Q86TL2 294 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 TDHQ8IZJ6 230 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 FUKQ8N0W3 1084 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 WDTC1Q8N5D0 677 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 SYNDIG1Q9H7V2 258 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 MRPL17Q9NRX2 175 aaKnown RBP8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 MSRAQ9UJ68 235 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 I3L4J1 428 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 ATP2C2O75185 946 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 PAPLNO95428 1278 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 ERBB2P04626 1255 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 CCDC130P13994 396 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 RAB33AQ14088 237 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 ZNF394Q53GI3 561 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 RNF187Q5TA31 235 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 PAQR9Q6ZVX9 377 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 SPATA2LQ8IUW3 424 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 SLC2A14Q8TDB8 520 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 TRIM62Q9BVG3 475 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 DMAP1Q9NPF5 467 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 ABCF3Q9NUQ8 709 aa8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 AFF4Q9UHB7 1163 aaKnown RBP8.87□□□□□ -0.99
PTPDC1-201ENST00000288976 SART1O43290 800 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 IFNB1P01574 187 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 PDGFRBP09619 1106 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 MAN1A1P33908 653 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 CTNNB1P35222 781 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 PLEKHA7Q6IQ23 1121 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 BEND5Q7L4P6 421 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 TMCO2Q7Z6W1 182 aaPredicted RBP8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 RABGGTAQ92696 567 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 MRPL47Q9HD33 250 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 KRT82Q9NSB4 513 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 GUCA1BQ9UMX6 200 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 TCRBV5S1A1TA0A578 114 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 H0YGN5 161 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 DPYSL4O14531 572 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 STAMBPO95630 424 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 FTLP02792 175 aaPredicted RBP8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 PSMC1P62191 440 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 NAA35Q5VZE5 725 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 CLEC20AQ6ZU45 233 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 ERICH1Q86X53 443 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 C3orf20Q8ND61 904 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 PSMB7Q99436 277 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 EMILIN2Q9BXX0 1053 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 NGRNQ9NPE2 291 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 ACP6Q9NPH0 428 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 PARVAQ9NVD7 372 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 EHD2Q9NZN4 543 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 MTUS1Q9ULD2 1270 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 MYO16Q9Y6X6 1858 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 GLI1P08151 1106 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 GALCP54803 685 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 C11orf63Q6NUN7 778 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms