RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TAS2R1Q9NYW7 299 aa13.96□□□□□ -0.17
SCAF4-201ENST00000286835 NAV1Q8NEY1 1877 aa13.96□□□□□ -0.17
SCAF4-201ENST00000286835 PAPPAQ13219 1627 aa13.96□□□□□ -0.17
SCAF4-201ENST00000286835 PRPF4O43172 522 aaKnown RBP eCLIP13.96□□□□□ -0.17
SCAF4-201ENST00000286835 STK10O94804 968 aaKnown RBP13.96□□□□□ -0.17
SCAF4-201ENST00000286835 CCNE2O96020 404 aa13.96□□□□□ -0.17
SCAF4-201ENST00000286835 SNRPAP09012 282 aaKnown RBP13.96□□□□□ -0.17
SCAF4-201ENST00000286835 HIRAP54198 1017 aaPredicted RBP13.96□□□□□ -0.17
SCAF4-201ENST00000286835 SESN2P58004 480 aaPredicted RBP13.96□□□□□ -0.17
SCAF4-201ENST00000286835 DSG1Q02413 1049 aa13.96□□□□□ -0.17
SCAF4-201ENST00000286835 MMEL1Q495T6 779 aa13.96□□□□□ -0.17
SCAF4-201ENST00000286835 MON1BQ7L1V2 547 aa13.96□□□□□ -0.17
SCAF4-201ENST00000286835 C7orf31Q8N865 590 aa13.96□□□□□ -0.17
SCAF4-201ENST00000286835 DDX1Q92499 740 aaKnown RBP13.96□□□□□ -0.17
SCAF4-201ENST00000286835 PTPRN2Q92932 1015 aa13.96□□□□□ -0.17
SCAF4-201ENST00000286835 CYP26B1Q9NR63 512 aa13.96□□□□□ -0.17
SCAF4-201ENST00000286835 E7ENQ6 273 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 CYB561D2O14569 222 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 LDHAP00338 332 aaKnown RBP13.96□□□□□ -0.18
SCAF4-201ENST00000286835 MAPTP10636 758 aaKnown RBP13.96□□□□□ -0.18
SCAF4-201ENST00000286835 MRPS9P82933 396 aaKnown RBP13.96□□□□□ -0.18
SCAF4-201ENST00000286835 MED21Q13503 144 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 ANKS1BQ7Z6G8 1248 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 SPATA24Q86W54 205 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 MAP7D3Q8IWC1 876 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 C2orf69Q8N8R5 385 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 ABTB1Q969K4 478 aaPredicted RBP13.96□□□□□ -0.18
SCAF4-201ENST00000286835 TEX13BQ9BXU2 312 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 KLC2Q9H0B6 622 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 ACAD9Q9H845 621 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 NRBP2Q9NSY0 501 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 TTLL3Q9Y4R7 772 aa13.96□□□□□ -0.18
SCAF4-201ENST00000286835 TM9SF1O15321 606 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 CDH8P55286 799 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 SLC25A3Q00325 362 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 BTKQ06187 659 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 C1QBPQ07021 282 aaKnown RBP13.95□□□□□ -0.18
SCAF4-201ENST00000286835 MMRN1Q13201 1228 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 PGM5Q15124 567 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 STXBP2Q15833 593 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 SPDYE2Q495Y8 402 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 MSS51Q4VC12 460 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 ARMC3Q5W041 872 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 ZNF516Q92618 1163 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 USP6NLQ92738 828 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 PDCD2LQ9BRP1 358 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 FIS1Q9Y3D6 152 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 hCG_1818297A0A087WSY0 165 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 TCRBV7S3A2A0A539 114 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 PFDN1O60925 122 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 CD48P09326 243 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 ZNF667Q5HYK9 610 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 C16orf46Q6P387 395 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 CCNYQ8ND76 341 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 SLCO2A1Q92959 643 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 NMD3Q96D46 503 aaKnown RBP13.95□□□□□ -0.18
SCAF4-201ENST00000286835 ANKRD36BP1Q96IX9 119 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 T-ENOLP0DO92 83 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 ATP6V1B1P15313 513 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 BST1Q10588 318 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 UBAP2LQ14157 1087 aaKnown RBP13.95□□□□□ -0.18
SCAF4-201ENST00000286835 PPP1R15BQ5SWA1 713 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 RIPOR1Q6ZS17 1223 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 TIPINQ9BVW5 301 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 MIS12Q9H081 205 aa13.95□□□□□ -0.18
SCAF4-201ENST00000286835 IQCA1LA6NCM1 817 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 PDGFRAP16234 1089 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 GARTP22102 1010 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 NCKAP1LP55160 1127 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 SNRPFP62306 86 aaKnown RBP13.94□□□□□ -0.18
SCAF4-201ENST00000286835 RPL10AP62906 217 aaKnown RBP13.94□□□□□ -0.18
SCAF4-201ENST00000286835 MOGSQ13724 837 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 LAMB3Q13751 1172 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 DUOXA2Q1HG44 320 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 ZACNQ401N2 412 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 TCHHL1Q5QJ38 904 aaPredicted RBP13.94□□□□□ -0.18
SCAF4-201ENST00000286835 RNASEH2BQ5TBB1 312 aaKnown RBP13.94□□□□□ -0.18
SCAF4-201ENST00000286835 ZBTB8OSQ8IWT0 167 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 NME8Q8N427 588 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 OLIG1Q8TAK6 271 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 ANKRD27Q96NW4 1050 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 MIPEPQ99797 713 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 STRIP2Q9ULQ0 834 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 CSDE1O75534 798 aaKnown RBP13.94□□□□□ -0.18
SCAF4-201ENST00000286835 KLRC2P26717 231 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 MCL1Q07820 350 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 RNF169Q8NCN4 708 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 CPT1BQ92523 772 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 APOPT1Q96IL0 206 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 TSNARE1Q96NA8 513 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 APOBEC3GQ9HC16 384 aaKnown RBP13.94□□□□□ -0.18
SCAF4-201ENST00000286835 ZNF302Q9NR11 478 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 RABGEF1Q9UJ41 708 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 YDJCA8MPS7 323 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 NEMP1O14524 444 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 AHCYL1O43865 530 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 ZC3H11AO75152 810 aaKnown RBP eCLIP13.94□□□□□ -0.18
SCAF4-201ENST00000286835 ZMPSTE24O75844 475 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 ACTR2P61160 394 aa13.94□□□□□ -0.18
SCAF4-201ENST00000286835 PLEKHG4Q58EX7 1191 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms