RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 FAM237BA0A1B0GVD1 139 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 HAT1O14929 419 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 ACTN1P12814 892 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 ITIH2P19823 946 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 GABRB3P28472 473 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 BMPR1AP36894 532 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 TRAPPC10P48553 1259 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 CASP5P51878 434 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 NKX2-5P52952 324 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-201ENST00000274071 P2RX3P56373 397 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 MRPS9P82933 396 aaKnown RBP9.59□□□□□ -0.87
PDGFC-201ENST00000274071 CDKL1Q00532 357 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 BNIP3Q12983 259 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 EPHA7Q15375 998 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 EEPD1Q7L9B9 569 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 RALGPS2Q86X27 583 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-201ENST00000274071 TRUB1Q8WWH5 349 aaKnown RBP9.59□□□□□ -0.87
PDGFC-201ENST00000274071 ATL1Q8WXF7 558 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 ZNF641Q96N77 438 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-201ENST00000274071 FERMT1Q9BQL6 677 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 TSSK1BQ9BXA7 367 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 TDRD1Q9BXT4 1180 aaKnown RBP9.59□□□□□ -0.87
PDGFC-201ENST00000274071 IMPG2Q9BZV3 1241 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 ALG13Q9NP73 1137 aaKnown RBP9.59□□□□□ -0.87
PDGFC-201ENST00000274071 CPQQ9Y646 472 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 MYH3P11055 1940 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 NUP98P52948 1817 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 GOLGA8IPA6NC78 632 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 TGDSO95455 350 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 PLCG1P19174 1290 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 ITGA8P53708 1063 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 SLC25A3Q00325 362 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 HSPA14Q0VDF9 509 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 CYP1B1Q16678 543 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 WDR78Q5VTH9 848 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 PLEKHA7Q6IQ23 1121 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 INTS5Q6P9B9 1019 aaKnown RBP9.59□□□□□ -0.87
PDGFC-201ENST00000274071 SLC51BQ86UW2 128 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 GALNT13Q8IUC8 556 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 KRT35Q92764 455 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 SLC2A11Q9BYW1 496 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 C12orf65Q9H3J6 166 aaKnown RBP9.59□□□□□ -0.87
PDGFC-201ENST00000274071 GREM2Q9H772 168 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 ANKMY1Q9P2S6 941 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 B3GNT3Q9Y2A9 372 aa9.59□□□□□ -0.87
PDGFC-201ENST00000274071 SYNGAP1Q96PV0 1343 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 LOC102724428A0A0B4J2F2 783 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 MEI4A8MW99 385 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 CCNT2O60583 730 aaKnown RBP9.58□□□□□ -0.88
PDGFC-201ENST00000274071 ZC3H11AO75152 810 aaKnown RBP eCLIP9.58□□□□□ -0.88
PDGFC-201ENST00000274071 GMNNO75496 209 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 TSPAN9O75954 239 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 IVDP26440 423 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 ADCY8P40145 1251 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 NR4A2P43354 598 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 CRKLP46109 303 aaKnown RBP9.58□□□□□ -0.88
PDGFC-201ENST00000274071 KRT6CP48668 564 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 MARCKSL1P49006 195 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 EPHB1P54762 984 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 CTSWP56202 376 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 SIK1P57059 783 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 PPP2R2BQ00005 443 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 SCARF1Q14162 830 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 HSF5Q4G112 596 aaPredicted RBP9.58□□□□□ -0.88
PDGFC-201ENST00000274071 RALGPS1Q5JS13 557 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 FGD3Q5JSP0 725 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 LDHAL6AQ6ZMR3 332 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 TAS2R42Q7RTR8 314 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 ZBTB46Q86UZ6 589 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 KBTBD6Q86V97 674 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 ZFPM1Q8IX07 1006 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 HACE1Q8IYU2 909 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 CLIP4Q8N3C7 705 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 MIGA1Q8NAN2 632 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 TOR1AIP2Q8NFQ8 470 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 ADAMTS16Q8TE57 1224 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 PEX13Q92968 403 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 CCDC124Q96CT7 223 aaKnown RBP9.58□□□□□ -0.88
PDGFC-201ENST00000274071 CDHR1Q96JP9 859 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 DHRS9Q9BPW9 319 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 MROQ9BYG7 248 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 WDR6Q9NNW5 1121 aaKnown RBP9.58□□□□□ -0.88
PDGFC-201ENST00000274071 NDFIP2Q9NV92 336 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 DAPK2Q9UIK4 370 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 SOX13Q9UN79 622 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 COL4A3BPQ9Y5P4 624 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 IGSF9BQ9UPX0 1349 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 EXOC1LA0A1B0GW35 172 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 A0A1W2PPW3 197 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 POC1B-GALNT4F8VUJ3 575 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 NAGAP17050 411 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 CTRB1P17538 263 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 GNA12Q03113 381 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 FUT2Q10981 343 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 CTRB2Q6GPI1 263 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 SLC30A10Q6XR72 485 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 PRPF39Q86UA1 669 aaKnown RBP9.58□□□□□ -0.88
PDGFC-201ENST00000274071 DTX3Q8N9I9 347 aa9.58□□□□□ -0.88
PDGFC-201ENST00000274071 JADE3Q92613 823 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms