RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 DUS2Q9NX74 493 aaKnown RBP9.58□□□□□ -0.88
TPM3-201ENST00000271850 HSPBP1Q9NZL4 362 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 ZMYM5Q9UJ78 669 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 ARHGAP26Q9UNA1 814 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 EXOC7Q9UPT5 735 aa9.58□□□□□ -0.88
TPM3-201ENST00000271850 LDHAP00338 332 aaKnown RBP9.57□□□□□ -0.88
TPM3-201ENST00000271850 PDGFRBP09619 1106 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 TMEM191BP0C7N4 346 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 DRD1P21728 446 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 BCKDHBP21953 392 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 MPLP40238 635 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 LHX1P48742 406 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 RPL10AP62906 217 aaKnown RBP9.57□□□□□ -0.88
TPM3-201ENST00000271850 DMC1Q14565 340 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 N4BP2L1Q5TBK1 243 aaPredicted RBP9.57□□□□□ -0.88
TPM3-201ENST00000271850 SHC4Q6S5L8 630 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 CCDC73Q6ZRK6 1079 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 SYT13Q7L8C5 426 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 TRAPPC11Q7Z392 1133 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 CACNA2D4Q7Z3S7 1137 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 SPATA2LQ8IUW3 424 aaPredicted RBP9.57□□□□□ -0.88
TPM3-201ENST00000271850 USP33Q8TEY7 942 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 NOC3LQ8WTT2 800 aaKnown RBP9.57□□□□□ -0.88
TPM3-201ENST00000271850 CACTINQ8WUQ7 758 aaKnown RBP9.57□□□□□ -0.88
TPM3-201ENST00000271850 CD101Q93033 1021 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 WBP2Q969T9 261 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 HPDLQ96IR7 371 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 LOXL4Q96JB6 756 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 SPATA17Q96L03 361 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 XYLT2Q9H1B5 865 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 AGPAT3Q9NRZ7 376 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 UXTQ9UBK9 157 aaPredicted RBP9.57□□□□□ -0.88
TPM3-201ENST00000271850 HCN2Q9UL51 889 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 CDH9Q9ULB4 789 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 SLC8A2Q9UPR5 921 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 MYOFQ9NZM1 2061 aa9.57□□□□□ -0.88
TPM3-201ENST00000271850 TRAV19A0A0A6YYK7 116 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 ZNF840PA6NDX5 716 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 F8VP50 259 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 LEFTY2O00292 366 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 TULP1O00294 542 aaPredicted RBP9.56□□□□□ -0.88
TPM3-201ENST00000271850 CLDN5O00501 218 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 CLIC2O15247 247 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 ST8SIA5O15466 376 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 ACTN4O43707 911 aaKnown RBP9.56□□□□□ -0.88
TPM3-201ENST00000271850 AKAP3O75969 853 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 ADH1BP00325 375 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 OAS1P00973 400 aaKnown RBP9.56□□□□□ -0.88
TPM3-201ENST00000271850 CYP17A1P05093 508 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 CKMP06732 381 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 USP17L7P0C7H9 530 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 CCDC192P0DO97 292 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 PCSK1P29120 753 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 SLC6A11P48066 632 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 PGFP49763 221 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 ALCAMQ13740 583 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 AASDHQ4L235 1098 aaPredicted RBP9.56□□□□□ -0.88
TPM3-201ENST00000271850 MDH1BQ5I0G3 518 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 STPG1Q5TH74 334 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 CNNM4Q6P4Q7 775 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 DENND5BQ6ZUT9 1274 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 PAQR9Q6ZVX9 377 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 DPH6Q7L8W6 267 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 RASSF3Q86WH2 238 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 WDR49Q8IV35 697 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 SYCP3Q8IZU3 236 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 PHTF2Q8N3S3 785 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 CPA6Q8N4T0 437 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 CAMKK1Q8N5S9 505 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 FRMD1Q8N878 549 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 TTC16Q8NEE8 873 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 ZNF507Q8TCN5 953 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 SCFD1Q8WVM8 642 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 P2RY11Q96G91 374 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 ANKRD36BP1Q96IX9 119 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 TPSD1Q9BZJ3 242 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 ZNF518BQ9C0D4 1074 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 TNMDQ9H2S6 317 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 ZDHHC4Q9NPG8 344 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 EBF1Q9UH73 591 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 INVSQ9Y283 1065 aa9.56□□□□□ -0.88
TPM3-201ENST00000271850 AKAP13Q12802 2813 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 NUP205Q92621 2012 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 IGF2RP11717 2491 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 TNRC6BQ9UPQ9 1833 aaKnown RBP9.55□□□□□ -0.88
TPM3-201ENST00000271850 ZNF233A6NK53 670 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 PATE3B3GLJ2 98 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 GIPC1O14908 333 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 ATG13O75143 517 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 TACC1O75410 805 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 HDCP19113 662 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 PDCP20941 246 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 TXLNAP40222 546 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 IFNAR2P48551 515 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 CASP4P49662 377 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 SEC13P55735 322 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 NOP14P78316 857 aaKnown RBP9.55□□□□□ -0.88
TPM3-201ENST00000271850 SLC7A9P82251 487 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 CYP27A1Q02318 531 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 CYP24A1Q07973 514 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms