RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
CDH11-201ENST00000268603 RTN2O75298 545 aa13.04□□□□□ -0.32
CDH11-201ENST00000268603 CCT8P50990 548 aa13.04□□□□□ -0.32
CDH11-201ENST00000268603 PTK7Q13308 1070 aa13.04□□□□□ -0.32
CDH11-201ENST00000268603 PEX5P50542 639 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
CDH11-201ENST00000268603 TRIQKQ629K1 86 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 HASPINQ8TF76 798 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 CYFIP2Q96F07 1278 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 TMEM117Q9H0C3 514 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 OXCT1P55809 520 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 PRAMEF18Q5VWM3 479 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 RPTNQ6XPR3 784 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 KRT74Q7RTS7 529 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 GPR141Q7Z602 305 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 HERC6Q8IVU3 1022 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 CLPBQ9H078 707 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 GPN3Q9UHW5 284 aaPredicted RBP13.03□□□□□ -0.32
CDH11-201ENST00000268603 HIST1H2ABP04908 130 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 IFNA16P05015 189 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 ITGB6P18564 788 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 PTGER2P43116 358 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 FAM83EQ2M2I3 478 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 CYP20A1Q6UW02 462 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 CEP68Q76N32 757 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 HIST3H2AQ7L7L0 130 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 SLC44A5Q8NCS7 719 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 SSH3Q8TE77 659 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 HIST1H2ACQ93077 130 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 REXO5Q96IC2 774 aaKnown RBP13.03□□□□□ -0.32
CDH11-201ENST00000268603 FAM118BQ9BPY3 351 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 METTL5Q9NRN9 209 aaKnown RBP13.03□□□□□ -0.32
CDH11-201ENST00000268603 TRIM10Q9UDY6 481 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 SMNDC1O75940 238 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDH11-201ENST00000268603 ZNF23P17027 643 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 GRIK3Q13003 919 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 TTC39BQ5VTQ0 682 aaPredicted RBP13.03□□□□□ -0.32
CDH11-201ENST00000268603 PRPF39Q86UA1 669 aaKnown RBP13.03□□□□□ -0.32
CDH11-201ENST00000268603 C4orf33Q8N1A6 199 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 LINC00301Q8NCQ3 95 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 MCOLN3Q8TDD5 553 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 VPS4BO75351 444 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 SUPT7LO94864 414 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 WEE2P0C1S8 567 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 ATP6V1B2P21281 511 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 EIF2S3P41091 472 aaKnown RBP13.03□□□□□ -0.32
CDH11-201ENST00000268603 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDH11-201ENST00000268603 ACOX1Q15067 660 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 EZH2Q15910 746 aaKnown RBP13.03□□□□□ -0.32
CDH11-201ENST00000268603 FNDC3BQ53EP0 1204 aaKnown RBP13.03□□□□□ -0.32
CDH11-201ENST00000268603 ATF7IP2Q5U623 682 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 GPT2Q8TD30 523 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 ZNF669Q96BR6 464 aaPredicted RBP13.03□□□□□ -0.32
CDH11-201ENST00000268603 ZNF333Q96JL9 665 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 ING3Q9NXR8 418 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 SH3BP4Q9P0V3 963 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 TUBGCP4Q9UGJ1 667 aa13.03□□□□□ -0.32
CDH11-201ENST00000268603 H3BMM5 538 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 ECDO95905 644 aaPredicted RBP13.02□□□□□ -0.32
CDH11-201ENST00000268603 VAV1P15498 845 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 AMD1P17707 334 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 C1DQ13901 141 aaKnown RBP13.02□□□□□ -0.32
CDH11-201ENST00000268603 STAT4Q14765 748 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 FAAH2Q6GMR7 532 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 CDC73Q6P1J9 531 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 PROSER1Q86XN7 944 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 DSELQ8IZU8 1212 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 VPS33AQ96AX1 596 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 BBS4Q96RK4 519 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 KIAA0232Q92628 1395 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 FAM187AA6NFU0 413 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 ADCY6O43306 1168 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 IFNA14P01570 189 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 EPHB2P29323 1055 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 PRCPP42785 496 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 IRX1P78414 480 aaPredicted RBP13.02□□□□□ -0.32
CDH11-201ENST00000268603 PKP1Q13835 747 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 NOTUMQ6P988 496 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 RDM1Q8NG50 284 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 ATL2Q8NHH9 583 aa13.02□□□□□ -0.32
CDH11-201ENST00000268603 A0A0G2JLW4 131 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 FAM220BPB1ANY3 271 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 SLC1A1P43005 524 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 PROSER3Q2NL68 480 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 QRICH1Q2TAL8 776 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 DHX40Q8IX18 779 aaKnown RBP13.02□□□□□ -0.33
CDH11-201ENST00000268603 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 PMM1Q92871 262 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 OSBPL9Q96SU4 736 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 RANBP17Q9H2T7 1088 aaKnown RBP13.02□□□□□ -0.33
CDH11-201ENST00000268603 UTYO14607 1347 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 PNMA6AP0CW24 399 aaPredicted RBP13.02□□□□□ -0.33
CDH11-201ENST00000268603 RHOAP61586 193 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 PKN2Q16513 984 aaKnown RBP13.02□□□□□ -0.33
CDH11-201ENST00000268603 NAPEPLDQ6IQ20 393 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 NT5DC3Q86UY8 548 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 ABHD10Q9NUJ1 306 aa13.02□□□□□ -0.33
CDH11-201ENST00000268603 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms