RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 APOBEC2Q9Y235 224 aaKnown RBP16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 HSD17B4P51659 736 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 ALYREFQ86V81 257 aaKnown RBP16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 SCUBE3Q8IX30 993 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 MCUQ8NE86 351 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 MTBPQ96DY7 904 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 TRIM56Q9BRZ2 755 aaKnown RBP16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 KLRG2A4D1S0 409 aaPredicted RBP16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 APOL1O14791 398 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 OGTO15294 1046 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 NPTXRO95502 500 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 TXNP10599 105 aaKnown RBP16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 SLC8A3P57103 927 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 FKBP1CQ5VVH2 108 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 TFAP2BQ92481 460 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 KLHL8Q9P2G9 620 aaPredicted RBP16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 TCRBV7S3A2A0A539 114 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 A8MXQ7 604 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 TCN1P20061 433 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 KCNA4P22459 653 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 MMP14P50281 582 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 STX3Q13277 289 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 CUL3Q13618 768 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 SNX30Q5VWJ9 437 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 DENND5BQ6ZUT9 1274 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 MON1BQ7L1V2 547 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 FBXO16Q8IX29 292 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 ALLCQ8N6M5 410 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 PGBD4Q96DM1 585 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 CLPTM1LQ96KA5 538 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 ZNF395Q9H8N7 513 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 NKX1-2Q9UD57 310 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 CYB561D2O14569 222 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 HSPA4LO95757 839 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 F7P08709 466 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 UNGP13051 313 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 NAMPTP43490 491 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 SERPINB4P48594 390 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 SNAPC2Q13487 334 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 SPDYCQ5MJ68 293 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 EEF1DP3Q658K8 133 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 RIBC1Q8N443 379 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 ARL8BQ9NVJ2 186 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 NDE1Q9NXR1 346 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 hCG_2014768A0A024R1R8 64 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 RBL1P28749 1068 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 SOX11P35716 441 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 PTDSS1P48651 473 aaKnown RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 SH3PXD2AQ5TCZ1 1133 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 RFWD3Q6PCD5 774 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 C12orf29Q8N999 325 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 HPDLQ96IR7 371 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 C17orf75Q9HAS0 396 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 SLC12A4Q9UP95 1085 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 COMMD10Q9Y6G5 202 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 ANKRD36CQ5JPF3 1778 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 ZNF541Q9H0D2 1346 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 hCG_1818297A0A087WSY0 165 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 CCL15-CCL14A0A0B4J2E2 113 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 SNRPAP09012 282 aaKnown RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 RFC5P40937 340 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 CAPSQ13938 189 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 CCL15Q16663 113 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 PTPN20Q4JDL3 420 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 PID1Q7Z2X4 250 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 CCNYL1Q8N7R7 359 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 RAB3IL1Q8TBN0 382 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 RNPEPL1Q9HAU8 725 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 DONSONQ9NYP3 566 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 KLK14Q9P0G3 267 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 ZMYND8Q9ULU4 1186 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 FNDC3AQ9Y2H6 1198 aaKnown RBP16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 BCORQ6W2J9 1755 aa16.85■□□□□ 0.29
PDZRN3-201ENST00000263666 ATXN2Q99700 1313 aaKnown RBP16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 TTLL13PA6NNM8 815 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 NDC80O14777 642 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 ZC3H11AO75152 810 aaKnown RBP eCLIP16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 USP12O75317 370 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 ZMPSTE24O75844 475 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 PDE5AO76074 875 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 PTGER2P43116 358 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 ZNF157P51786 506 aaPredicted RBP16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 SNRPFP62306 86 aaKnown RBP16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 LAMTOR4Q0VGL1 99 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 CATSPER4Q7RTX7 472 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 FAM131BQ86XD5 332 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 SRPK1Q96SB4 655 aaKnown RBP16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 SYT17Q9BSW7 474 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 ASCC2Q9H1I8 757 aaPredicted RBP16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 PTPN4P29074 926 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 CCDC14Q49A88 953 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 ZC3H12AQ5D1E8 599 aaKnown RBP16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 SEC14L1Q92503 715 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 CD101Q93033 1021 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 AP5M1Q9H0R1 490 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 EDF1O60869 148 aaKnown RBP16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 GPD1P21695 349 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 CALB2P22676 271 aa16.84■□□□□ 0.29
PDZRN3-201ENST00000263666 GOLGA7BQ2TAP0 167 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms