RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 FAM167BQ9BTA0 163 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 PSD3Q9NYI0 1048 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 HACD3Q9P035 362 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 SLITRK3O94933 977 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 TGM2P21980 687 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 ELF2Q15723 593 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 KLHL35Q6PF15 583 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 CLEC17AQ6ZS10 378 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 MCOLN3Q8TDD5 553 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 WFIKKN2Q8TEU8 576 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 SLC39A8Q9C0K1 460 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 LMAN2LQ9H0V9 348 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 TMEM60Q9H2L4 133 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 TRHDEQ9UKU6 1024 aa13.96□□□□□ -0.17
PRPF38A-201ENST00000257181 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.18
PRPF38A-201ENST00000257181 H3BMM5 538 aa13.96□□□□□ -0.18
PRPF38A-201ENST00000257181 MMS22LQ6ZRQ5 1243 aa13.96□□□□□ -0.18
PRPF38A-201ENST00000257181 ACAD11Q709F0 780 aa13.96□□□□□ -0.18
PRPF38A-201ENST00000257181 BRD9Q9H8M2 597 aa13.96□□□□□ -0.18
PRPF38A-201ENST00000257181 HACD1B0YJ81 288 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 KRT14P02533 472 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 FGGP02679 453 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 GLI1P08151 1106 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 EPHB2P29323 1055 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 DPP6P42658 865 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 ABCE1P61221 599 aaKnown RBP13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 SLC39A12Q504Y0 691 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 SYCP2LQ5T4T6 812 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 KLHDC7AQ5VTJ3 777 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 DENND5BQ6ZUT9 1274 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 SMG7Q92540 1137 aaKnown RBP13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 MAGEB10Q96LZ2 347 aaPredicted RBP13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 SERPINI1Q99574 410 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 KCPQ6ZWJ8 1503 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 MAGEB16A2A368 324 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 HTR1BP28222 390 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 NAA20P61599 178 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 SNRPD1P62314 119 aaKnown RBP13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 AVL9Q8NBF6 648 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 ARHGEF38Q9NXL2 777 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 UBA6A0AVT1 1052 aaPredicted RBP13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 TRIM49BA6NDI0 452 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 GLRA4Q5JXX5 417 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 EMBQ6PCB8 327 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 EXD1Q8NHP7 514 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 GDAP1L1Q96MZ0 367 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 MEI4A8MW99 385 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 KPNA5O15131 536 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 NSUN2Q08J23 767 aaKnown RBP eCLIP13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 GPM6BQ13491 265 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 FIGNQ5HY92 759 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 PTF1AQ7RTS3 328 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 NUP93Q8N1F7 819 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 PSMB7Q99436 277 aa13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 CDCA3Q99618 268 aaPredicted RBP13.95□□□□□ -0.18
PRPF38A-201ENST00000257181 POC1B-GALNT4F8VUJ3 575 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 CXCL8P10145 99 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 CD52P31358 61 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 ZNF131P52739 623 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 GJA9P57773 515 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 DHX40Q8IX18 779 aaKnown RBP13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 TEKT4Q8WW24 435 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 PRKD2Q9BZL6 878 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 Q9H521 79 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 SLC39A10Q9ULF5 831 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 STARD13Q9Y3M8 1113 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 COPEO14579 308 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 PRPF4O43172 522 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 ERVK-10P10266 1014 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 ATP1A3P13637 1013 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 SERPINA4P29622 427 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 HADHAP40939 763 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 GUCY2DQ02846 1103 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 ZC2HC1CQ53FD0 456 aaPredicted RBP13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 GRAMD4Q6IC98 578 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 ACOT1Q86TX2 421 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 ACDQ96AP0 544 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 MCEEQ96PE7 176 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 TGS1Q96RS0 853 aaKnown RBP13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 OMDQ99983 421 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 FGFR1OP2Q9NVK5 253 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 TMCO1Q9UM00 188 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 FRMD3A2A2Y4 597 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 LACTBL1A8MY62 500 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 ALPPL2P10696 532 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 NR2C2P49116 596 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 USP4Q13107 963 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 MOB2Q70IA6 237 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 CXorf40AQ8TE69 158 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 PRPF18Q99633 342 aaKnown RBP13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 CYLDQ9NQC7 956 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 RAMP2O60895 175 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 CLCN1P35523 988 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 MAP3K7CLP57077 242 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 FBXW4P57775 412 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 TP53BP2Q13625 1128 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 USP45Q70EL2 814 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 IRGQQ8WZA9 623 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms