RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 SLC35B4Q969S0 331 aa21.3■■□□□ 1
RARA-201ENST00000254066 E2F7Q96AV8 911 aa21.3■■□□□ 1
RARA-201ENST00000254066 KLF6Q99612 283 aaPredicted RBP21.3■■□□□ 1
RARA-201ENST00000254066 TRPV5Q9NQA5 729 aa21.3■■□□□ 1
RARA-201ENST00000254066 RAB20Q9NX57 234 aa21.3■■□□□ 1
RARA-201ENST00000254066 MKS1Q9NXB0 559 aa21.3■■□□□ 1
RARA-201ENST00000254066 AK5Q9Y6K8 562 aa21.3■■□□□ 1
RARA-201ENST00000254066 TGFB2P61812 414 aa21.29■■□□□ 1
RARA-201ENST00000254066 PTK7Q13308 1070 aa21.29■■□□□ 1
RARA-201ENST00000254066 NCOA4Q13772 614 aa21.29■■□□□ 1
RARA-201ENST00000254066 APOFQ13790 326 aa21.29■■□□□ 1
RARA-201ENST00000254066 SH3D19Q5HYK7 790 aa21.29■■□□□ 1
RARA-201ENST00000254066 OTOP1Q7RTM1 612 aa21.29■■□□□ 1
RARA-201ENST00000254066 ERI1Q8IV48 349 aaKnown RBP21.29■■□□□ 1
RARA-201ENST00000254066 ARID3BQ8IVW6 561 aaPredicted RBP21.29■■□□□ 1
RARA-201ENST00000254066 ARL10Q8N8L6 244 aa21.29■■□□□ 1
RARA-201ENST00000254066 SERAC1Q96JX3 654 aa21.29■■□□□ 1
RARA-201ENST00000254066 SIRPGQ9P1W8 387 aa21.29■■□□□ 1
RARA-201ENST00000254066 FOCADQ5VW36 1801 aa21.29■■□□□ 1
RARA-201ENST00000254066 MYPNQ86TC9 1320 aa21.29■■□□□ 1
RARA-201ENST00000254066 SDR42E2A6NKP2 422 aa21.29■■□□□ 1
RARA-201ENST00000254066 SPAG6O75602 509 aa21.29■■□□□ 1
RARA-201ENST00000254066 PORP16435 677 aaPredicted RBP21.29■■□□□ 1
RARA-201ENST00000254066 CD58P19256 250 aa21.29■■□□□ 1
RARA-201ENST00000254066 EIF4BP23588 611 aaKnown RBP21.29■■□□□ 1
RARA-201ENST00000254066 NSFP46459 744 aaKnown RBP21.29■■□□□ 1
RARA-201ENST00000254066 PPIDQ08752 370 aaKnown RBP21.29■■□□□ 1
RARA-201ENST00000254066 TLR1Q15399 786 aa21.29■■□□□ 1
RARA-201ENST00000254066 LRRC38Q5VT99 294 aa21.29■■□□□ 1
RARA-201ENST00000254066 DHRS4L2Q6PKH6 230 aa21.29■■□□□ 1
RARA-201ENST00000254066 Q6ZNX1 250 aa21.29■■□□□ 1
RARA-201ENST00000254066 TTC13Q8NBP0 860 aa21.29■■□□□ 1
RARA-201ENST00000254066 PLEKHO2Q8TD55 490 aa21.29■■□□□ 1
RARA-201ENST00000254066 SLITRK1Q96PX8 696 aa21.29■■□□□ 1
RARA-201ENST00000254066 FRMD8P1Q9BZ68 369 aaPredicted RBP21.29■■□□□ 1
RARA-201ENST00000254066 PCIF1Q9H4Z3 704 aa21.29■■□□□ 1
RARA-201ENST00000254066 HSPBP1Q9NZL4 362 aa21.29■■□□□ 1
RARA-201ENST00000254066 SCINQ9Y6U3 715 aa21.29■■□□□ 1
RARA-201ENST00000254066 LOXHD1Q8IVV2 1947 aa21.29■■□□□ 1
RARA-201ENST00000254066 COPEO14579 308 aa21.28■■□□□ 1
RARA-201ENST00000254066 ETS1P14921 441 aa21.28■■□□□ 1
RARA-201ENST00000254066 ACAT1P24752 427 aaKnown RBP21.28■■□□□ 1
RARA-201ENST00000254066 ECE1P42892 770 aa21.28■■□□□ 1
RARA-201ENST00000254066 BST1Q10588 318 aa21.28■■□□□ 1
RARA-201ENST00000254066 KLHL35Q6PF15 583 aa21.28■■□□□ 1
RARA-201ENST00000254066 NCCRP1Q6ZVX7 275 aaPredicted RBP21.28■■□□□ 1
RARA-201ENST00000254066 MON1BQ7L1V2 547 aa21.28■■□□□ 1
RARA-201ENST00000254066 ZNF410Q86VK4 478 aa21.28■■□□□ 1
RARA-201ENST00000254066 CCDC33Q8N5R6 958 aa21.28■■□□□ 1
RARA-201ENST00000254066 SAMD3Q8N6K7 520 aa21.28■■□□□ 1
RARA-201ENST00000254066 NAT8LQ8N9F0 302 aa21.28■■□□□ 1
RARA-201ENST00000254066 FBXO36Q8NEA4 188 aa21.28■■□□□ 1
RARA-201ENST00000254066 SEMA4DQ92854 862 aa21.28■■□□□ 1
RARA-201ENST00000254066 BIRC8Q96P09 236 aa21.28■■□□□ 1
RARA-201ENST00000254066 P2RX7Q99572 595 aaKnown RBP21.28■■□□□ 1
RARA-201ENST00000254066 TMEM8AQ9HCN3 771 aa21.28■■□□□ 1
RARA-201ENST00000254066 PMLP29590 882 aa21.28■■□□□ 1
RARA-201ENST00000254066 AQP5P55064 265 aa21.28■■□□□ 1
RARA-201ENST00000254066 EIF6P56537 245 aaKnown RBP21.28■■□□□ 1
RARA-201ENST00000254066 ZNF200P98182 395 aaPredicted RBP21.28■■□□□ 1
RARA-201ENST00000254066 TMEM62Q0P6H9 643 aa21.28■■□□□ 1
RARA-201ENST00000254066 LPIN1Q14693 890 aa21.28■■□□□ 1
RARA-201ENST00000254066 C15orf52Q6ZUT6 534 aaKnown RBP21.28■■□□□ 1
RARA-201ENST00000254066 KCTD1Q719H9 257 aa21.28■■□□□ 1
RARA-201ENST00000254066 KBTBD6Q86V97 674 aa21.28■■□□□ 1
RARA-201ENST00000254066 DHX38Q92620 1227 aaKnown RBP21.28■■□□□ 1
RARA-201ENST00000254066 ACAP3Q96P50 834 aa21.28■■□□□ 1
RARA-201ENST00000254066 K7ENM7 598 aa21.27■■□□□ 1
RARA-201ENST00000254066 FAM189A1O60320 539 aa21.27■■□□□ 1
RARA-201ENST00000254066 DNAJA2O60884 412 aa21.27■■□□□ 1
RARA-201ENST00000254066 CBFA2T3O75081 653 aa21.27■■□□□ 1
RARA-201ENST00000254066 INHBAP08476 426 aa21.27■■□□□ 1
RARA-201ENST00000254066 TMPRSS15P98073 1019 aa21.27■■□□□ 1
RARA-201ENST00000254066 GCNT1Q02742 428 aa21.27■■□□□ 1
RARA-201ENST00000254066 TEX44Q53QW1 395 aa21.27■■□□□ 1
RARA-201ENST00000254066 TRIM72Q6ZMU5 477 aa21.27■■□□□ 1
RARA-201ENST00000254066 SRPK1Q96SB4 655 aaKnown RBP21.27■■□□□ 1
RARA-201ENST00000254066 BCS1LQ9Y276 419 aa21.27■■□□□ 1
RARA-201ENST00000254066 PCDHB2Q9Y5E7 798 aa21.27■■□□□ 1
RARA-201ENST00000254066 SF3B1O75533 1304 aaKnown RBP eCLIP21.27■■□□□ 19e-6■■■■■ 68.9
RARA-201ENST00000254066 SH3PXD2BA1X283 911 aa21.27■■□□□ 1
RARA-201ENST00000254066 C6orf229H3BNL8 230 aa21.27■■□□□ 1
RARA-201ENST00000254066 SNNO75324 88 aaPredicted RBP21.27■■□□□ 1
RARA-201ENST00000254066 EEF2P13639 858 aaKnown RBP21.27■■□□□ 1
RARA-201ENST00000254066 RAG1P15918 1043 aa21.27■■□□□ 1
RARA-201ENST00000254066 YBX3P16989 372 aaKnown RBP eCLIP21.27■■□□□ 1
RARA-201ENST00000254066 VARSP26640 1264 aaKnown RBP21.27■■□□□ 1
RARA-201ENST00000254066 SLC5A2P31639 672 aa21.27■■□□□ 1
RARA-201ENST00000254066 ALDH1A3P47895 512 aa21.27■■□□□ 1
RARA-201ENST00000254066 HSPA13P48723 471 aa21.27■■□□□ 1
RARA-201ENST00000254066 ALDH18A1P54886 795 aaKnown RBP21.27■■□□□ 1
RARA-201ENST00000254066 GRAMD1BQ3KR37 738 aa21.27■■□□□ 1
RARA-201ENST00000254066 MDH1BQ5I0G3 518 aa21.27■■□□□ 1
RARA-201ENST00000254066 TRIM67Q6ZTA4 783 aa21.27■■□□□ 1
RARA-201ENST00000254066 RHPN2Q8IUC4 686 aa21.27■■□□□ 1
RARA-201ENST00000254066 CEP70Q8NHQ1 597 aa21.27■■□□□ 1
RARA-201ENST00000254066 RILPQ96NA2 401 aa21.27■■□□□ 1
RARA-201ENST00000254066 NYXQ9GZU5 481 aa21.27■■□□□ 1
RARA-201ENST00000254066 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.27■■□□□ 1
RARA-201ENST00000254066 PLLPQ9Y342 182 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms