RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CYTH4Q9UIA0 394 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 CEP83Q9Y592 693 aa14.89□□□□□ -0.03
VPS25-201ENST00000253794 FGF19O95750 216 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 UNGP13051 313 aaPredicted RBP14.88□□□□□ -0.03
VPS25-201ENST00000253794 PTPN2P17706 415 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 ACADSBP45954 432 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 CCDC85BQ15834 202 aaPredicted RBP14.88□□□□□ -0.03
VPS25-201ENST00000253794 CLEC16AQ2KHT3 1053 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 TSR1Q2NL82 804 aaKnown RBP14.88□□□□□ -0.03
VPS25-201ENST00000253794 ASTE1Q2TB18 679 aaPredicted RBP14.88□□□□□ -0.03
VPS25-201ENST00000253794 RARS2Q5T160 578 aaKnown RBP14.88□□□□□ -0.03
VPS25-201ENST00000253794 SDHAF4Q5VUM1 108 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 TAF3Q5VWG9 929 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 PM20D1Q6GTS8 502 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 PPP1R2P3Q6NXS1 205 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 TMC5Q6UXY8 1006 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 GPRIN1Q7Z2K8 1008 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 C12orf76Q8N812 135 aaPredicted RBP14.88□□□□□ -0.03
VPS25-201ENST00000253794 SMG7Q92540 1137 aaKnown RBP14.88□□□□□ -0.03
VPS25-201ENST00000253794 HLA-CQ95604 372 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 PDLIM2Q96JY6 352 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 NOX5Q96PH1 765 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 FBXO44Q9H4M3 255 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 IL21Q9HBE4 155 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 ZNHIT6Q9NWK9 470 aaKnown RBP14.88□□□□□ -0.03
VPS25-201ENST00000253794 DNMT3BQ9UBC3 853 aaKnown RBP14.88□□□□□ -0.03
VPS25-201ENST00000253794 UXTQ9UBK9 157 aaPredicted RBP14.88□□□□□ -0.03
VPS25-201ENST00000253794 CD207Q9UJ71 328 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 NENFQ9UMX5 172 aa14.88□□□□□ -0.03
VPS25-201ENST00000253794 SOBPA7XYQ1 873 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 GABBR2O75899 941 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 GZMAP12544 262 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 SKILP12757 684 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 GABRB2P47870 512 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 PPP3CCP48454 512 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 GSDMDP57764 484 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 USP46P62068 366 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 GOLGA8FQ08AF8 430 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 GOLGA8DPQ0D2H9 430 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 MTMR3Q13615 1198 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 TDRD12Q587J7 1177 aaKnown RBP14.87□□□□□ -0.03
VPS25-201ENST00000253794 SNX30Q5VWJ9 437 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 CCDC186Q7Z3E2 898 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 C1orf131Q8NDD1 294 aaKnown RBP14.87□□□□□ -0.03
VPS25-201ENST00000253794 GIPC2Q8TF65 315 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 WDR6Q9NNW5 1121 aaKnown RBP14.87□□□□□ -0.03
VPS25-201ENST00000253794 CNGB3Q9NQW8 809 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 SCML2Q9UQR0 700 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 GREB1Q4ZG55 1949 aa14.87□□□□□ -0.03
VPS25-201ENST00000253794 PRUNE2Q8WUY3 3088 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 SPDYE4A6NLX3 237 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 GOLGA6L6A8MZA4 724 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 DDX3XO00571 662 aaKnown RBP eCLIP14.86□□□□□ -0.039e-14■■■□□ 17.4
VPS25-201ENST00000253794 FBXO21O94952 628 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 F11P03951 625 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 RHOP08100 348 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 ZDHHC11BP0C7U3 371 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 MMP8P22894 467 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 YWHAQP27348 245 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 SSTR3P32745 418 aaPredicted RBP14.86□□□□□ -0.03
VPS25-201ENST00000253794 MTHFRP42898 656 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 TKTL1P51854 596 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 GSCP56915 257 aaPredicted RBP14.86□□□□□ -0.03
VPS25-201ENST00000253794 SNX16P57768 344 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 SMAD4Q13485 552 aaKnown RBP14.86□□□□□ -0.03
VPS25-201ENST00000253794 LEXMQ3ZCV2 418 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 PTPN20Q4JDL3 420 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 PRSS36Q5K4E3 855 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 CES5AQ6NT32 575 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 TMEM150AQ86TG1 271 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 VPS36Q86VN1 386 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 PHF13Q86YI8 300 aaPredicted RBP14.86□□□□□ -0.03
VPS25-201ENST00000253794 GPIHBP1Q8IV16 184 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 PASD1Q8IV76 773 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 ZNF276Q8N554 614 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 PDZD8Q8NEN9 1154 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 SCAMP5Q8TAC9 235 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 FEZF2Q8TBJ5 459 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 GPR152Q8TDT2 470 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 IRGQQ8WZA9 623 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 PPP1R13BQ96KQ4 1090 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 RIPOR3Q96MK2 946 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 NECTIN4Q96NY8 510 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 CPXM1Q96SM3 734 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 PDCL3Q9H2J4 239 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 LRRC4Q9HBW1 653 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 ZNF334Q9HCZ1 680 aaPredicted RBP14.86□□□□□ -0.03
VPS25-201ENST00000253794 ASAH2Q9NR71 780 aa14.86□□□□□ -0.03
VPS25-201ENST00000253794 MOSPD3O75425 235 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 TADA3O75528 432 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 ZBED1O96006 694 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 PLEKP08567 350 aaPredicted RBP14.85□□□□□ -0.03
VPS25-201ENST00000253794 TNFAIP3P21580 790 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 KCNA5P22460 613 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 CDC25CP30307 473 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 SCNN1AP37088 669 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 PTP4A2Q12974 167 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 PUS10Q3MIT2 529 aaKnown RBP14.85□□□□□ -0.03
VPS25-201ENST00000253794 PABPC1LQ4VXU2 614 aaKnown RBP14.85□□□□□ -0.03
VPS25-201ENST00000253794 ATAT1Q5SQI0 421 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms