RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 EIF3EP60228 445 aaKnown RBP22.69■■□□□ 1.22
CLN6-201ENST00000249806 CCDC142Q17RM4 750 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 SCYL2Q6P3W7 929 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 SLC35F5Q8WV83 523 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 KHSRPQ92945 711 aaKnown RBP eCLIP22.69■■□□□ 1.228e-8■□□□□ 8.3
CLN6-201ENST00000249806 CCDC77Q9BR77 488 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 RRAGCQ9HB90 399 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 MLXIPLQ9NP71 852 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 KCNK9Q9NPC2 374 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 CNTN3Q9P232 1028 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 FARP1Q9Y4F1 1045 aaPredicted RBP22.69■■□□□ 1.22
CLN6-201ENST00000249806 RALGAPA2Q2PPJ7 1873 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 CDH16O75309 829 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 KIAA0754O94854 1291 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 PDGFRBP09619 1106 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 ATP5DP30049 168 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 ADAM17P78536 824 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 PDIA2Q13087 525 aaKnown RBP22.69■■□□□ 1.22
CLN6-201ENST00000249806 MPP2Q14168 576 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 SNX17Q15036 470 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 STILQ15468 1287 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 CST9Q5W186 159 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 LRRC34Q8IZ02 419 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 OTUD6BQ8N6M0 293 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 FAM71DQ8N9W8 422 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 SPATA18Q8TC71 538 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 CPT1BQ92523 772 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 MIS12Q9H081 205 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 RSAD1Q9HA92 442 aa22.69■■□□□ 1.22
CLN6-201ENST00000249806 A0A087WUV0 522 aaPredicted RBP22.68■■□□□ 1.22
CLN6-201ENST00000249806 A8MXQ7 604 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 IGF2BP3O00425 579 aaKnown RBP eCLIP22.68■■□□□ 1.22
CLN6-201ENST00000249806 PRPSAP2O60256 369 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 ENDOD1O94919 500 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 RNF187Q5TA31 235 aaPredicted RBP22.68■■□□□ 1.22
CLN6-201ENST00000249806 GKAP1Q5VSY0 366 aaPredicted RBP22.68■■□□□ 1.22
CLN6-201ENST00000249806 CEP128Q6ZU80 1094 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 SESTD1Q86VW0 696 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 LRRC52Q8N7C0 313 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 CABS1Q96KC9 395 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 MAK16Q9BXY0 300 aaKnown RBP22.68■■□□□ 1.22
CLN6-201ENST00000249806 SLC4A5Q9BY07 1137 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 FRMD8P1Q9BZ68 369 aaPredicted RBP22.68■■□□□ 1.22
CLN6-201ENST00000249806 NGRNQ9NPE2 291 aaKnown RBP22.68■■□□□ 1.22
CLN6-201ENST00000249806 GPATCH2LQ9NWQ4 482 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 LGALS13Q9UHV8 139 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 SHOC2Q9UQ13 582 aa22.68■■□□□ 1.22
CLN6-201ENST00000249806 SMIM28A0A1B0GU29 152 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 SPTLC1O15269 473 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 ALOX15BO15296 676 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 PAPSS1O43252 624 aaPredicted RBP22.67■■□□□ 1.22
CLN6-201ENST00000249806 ABHD2P08910 425 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 RBP3P10745 1247 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 BRAFP15056 766 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 LMO2P25791 158 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 GCAP28676 217 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 PSEN2P49810 448 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 MTM1Q13496 603 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 DPYSL3Q14195 570 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 ZNF618Q5T7W0 954 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 TMEM110Q86TL2 294 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 ZC3H18Q86VM9 953 aaKnown RBP22.67■■□□□ 1.22
CLN6-201ENST00000249806 ANKMY2Q8IV38 441 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 SRRM1Q8IYB3 904 aaKnown RBP22.67■■□□□ 1.22
CLN6-201ENST00000249806 CCDC13Q8IYE1 715 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 ANKRD42Q8N9B4 389 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 GOLGA2P5Q9HBQ8 144 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 EURLQ9NYK6 297 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 GGA2Q9UJY4 613 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 EXOC1LA0A1B0GW35 172 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 TCRBV7S3A2A0A539 114 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 MYL3P08590 195 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 CYP2B6P20813 491 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 SLC6A3Q01959 620 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 ZC3H12AQ5D1E8 599 aaKnown RBP22.67■■□□□ 1.22
CLN6-201ENST00000249806 CACNA2D3Q8IZS8 1091 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 VPS37BQ9H9H4 285 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 HESX1Q9UBX0 185 aa22.67■■□□□ 1.22
CLN6-201ENST00000249806 CEP350Q5VT06 3117 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 FGFR1P11362 822 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 MSS51Q4VC12 460 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 FBXO47Q5MNV8 452 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 CENPUQ71F23 418 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 TADA2BQ86TJ2 420 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 CLEC4CQ8WTT0 213 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 FAM172AQ8WUF8 416 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 CCDC134Q9H6E4 229 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 UBQLN1Q9UMX0 589 aaKnown RBP22.66■■□□□ 1.22
CLN6-201ENST00000249806 ATXN2Q99700 1313 aaKnown RBP22.66■■□□□ 1.22
CLN6-201ENST00000249806 POC1B-GALNT4F8VUJ3 575 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 PIRO00625 290 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 MCF2LO15068 1137 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 VIMP08670 466 aaKnown RBP22.66■■□□□ 1.22
CLN6-201ENST00000249806 CCDC130P13994 396 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 TFE3P19532 575 aaPredicted RBP22.66■■□□□ 1.22
CLN6-201ENST00000249806 TMED2Q15363 201 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 HIF1AQ16665 826 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 FNBP1LQ5T0N5 605 aa22.66■■□□□ 1.22
CLN6-201ENST00000249806 YTHDF3Q7Z739 585 aaKnown RBP22.66■■□□□ 1.22
CLN6-201ENST00000249806 PCGF5Q86SE9 256 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms