RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 CLSTN1O94985 981 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 APBB3O95704 486 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 STAU1O95793 577 aaKnown RBP13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 ABL1P00519 1130 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 TIE1P35590 1138 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 SLC7A9P82251 487 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 EHHADHQ08426 723 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 PPM1JQ5JR12 505 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 NAIF1Q69YI7 327 aaPredicted RBP13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 C12orf56Q8IXR9 622 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 ZC3H10Q96K80 434 aaKnown RBP13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 BLZF1Q9H2G9 400 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 SLC39A2Q9NP94 309 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 NXF1Q9UBU9 619 aaKnown RBP13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 EBF1Q9UH73 591 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 ATP8B3O60423 1300 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 ZNF638Q14966 1978 aaKnown RBP13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 ZNF840PA6NDX5 716 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 RHOBTB1O94844 696 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 ADRB1P08588 477 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 AFMP43652 599 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 LIMK1P53667 647 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 AP3M2P53677 418 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 MYL6P60660 151 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 SF3A2Q15428 464 aaKnown RBP13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 ELF2Q15723 593 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 KNOP1Q1ED39 458 aaKnown RBP13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 BMT2Q1RMZ1 405 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 DDX42Q86XP3 938 aaKnown RBP eCLIP13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 CEP57L1Q8IYX8 460 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 PDZD8Q8NEN9 1154 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 GOLGA5Q8TBA6 731 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 EZH1Q92800 747 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 IPO9Q96P70 1041 aaKnown RBP13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 CPQQ9Y646 472 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 RTN3O95197 1032 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 OLFM2O95897 454 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 CMA1P23946 247 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 CASP1P29466 404 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 MPLP40238 635 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 DGKEP52429 567 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 IFRD2Q12894 506 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 TAF10Q12962 218 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 BIRC3Q13489 604 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 CCDC6Q16204 474 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 PLK5Q496M5 336 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 FILIP1Q7Z7B0 1213 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 C11orf74Q86VG3 221 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 NUP93Q8N1F7 819 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 B3GALNT2Q8NCR0 500 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 TSTD1Q8NFU3 115 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 ZNF516Q92618 1163 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 CNTNAP3BQ96NU0 1288 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 CNTNAP3Q9BZ76 1288 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 ZNF518BQ9C0D4 1074 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 DPEP3Q9H4B8 488 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 VPS45Q9NRW7 570 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 POLR3BQ9NW08 1133 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 NME7Q9Y5B8 376 aa13.73□□□□□ -0.21
APOBEC3A-201ENST00000249116 FRYLO94915 3013 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 CEP250Q9BV73 2442 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 OAS1P00973 400 aaKnown RBP13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 CYP17A1P05093 508 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 MBL2P11226 248 aaPredicted RBP13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 PFKFB1P16118 471 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 YWHAQP27348 245 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 OPRD1P41143 372 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 ZXDBP98169 803 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 CUL4BQ13620 913 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 ZNF699Q32M78 642 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 USP39Q53GS9 565 aaKnown RBP13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 ZNF667Q5HYK9 610 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 ADGRG2Q8IZP9 1017 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 USP33Q8TEY7 942 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 OVCA2Q8WZ82 227 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 FBXO32Q969P5 355 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 TNIP3Q96KP6 325 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 MED10Q9BTT4 135 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 B3GNT5Q9BYG0 378 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 RNF38Q9H0F5 515 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 XYLT2Q9H1B5 865 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 DUSP15Q9H1R2 295 aaPredicted RBP13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 VRTNQ9H8Y1 702 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 SMPD4Q9NXE4 827 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 TBC1D14Q9P2M4 693 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 HPSEQ9Y251 543 aa13.72□□□□□ -0.21
APOBEC3A-201ENST00000249116 FAM237AA0A1B0GTK4 181 aa13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 A0A1B0GVL5 298 aa13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 A0A1W2PQ27 194 aa13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 A0A1W2PQ64 194 aa13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 A0A1W2PQD8 194 aa13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 CLDN5O00501 218 aa13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 GBP1P32455 592 aa13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 EIF2DP41214 584 aaKnown RBP13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 CACNA2D1P54289 1103 aa13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 SEC13P55735 322 aa13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 MRPS21P82921 87 aaKnown RBP13.71□□□□□ -0.22
APOBEC3A-201ENST00000249116 DHCR24Q15392 516 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms