RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 TMEM176AQ96HP8 235 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 SEC16BQ96JE7 1060 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 C11orf49Q9H6J7 331 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 GTF2IRD1Q9UHL9 959 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 LGALS13Q9UHV8 139 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 ZNF148Q9UQR1 794 aa13.33□□□□□ -0.28
SNAI1-201ENST00000244050 PIN4Q9Y237 131 aaKnown RBP13.33□□□□□ -0.28
SNAI1-201ENST00000244050 TRIP11Q15643 1979 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 LRRD1A4D1F6 860 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 M0QZ92 97 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 ITGB3P05106 788 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 ASGR1P07306 291 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 COL6A1P12109 1028 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 AXLP30530 894 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 RAP1GAPP47736 663 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 CDH8P55286 799 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 PSMC1P62191 440 aaKnown RBP13.32□□□□□ -0.28
SNAI1-201ENST00000244050 NKX3-2P78367 333 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 SLC25A11Q02978 314 aaKnown RBP13.32□□□□□ -0.28
SNAI1-201ENST00000244050 CNGA2Q16280 664 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 CCDC142Q17RM4 750 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 P3H1Q32P28 736 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 GKAP1Q5VSY0 366 aaPredicted RBP13.32□□□□□ -0.28
SNAI1-201ENST00000244050 LHX8Q68G74 356 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 XYLT1Q86Y38 959 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 NT5DC4Q86YG4 428 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 CACNA2D3Q8IZS8 1091 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 TTC39CQ8N584 583 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 ARFGAP1Q8N6T3 406 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 SLC35B2Q8TB61 432 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 ARHGEF2Q92974 986 aaKnown RBP13.32□□□□□ -0.28
SNAI1-201ENST00000244050 MCRS1Q96EZ8 462 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 CCDC77Q9BR77 488 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 EIF2AQ9BY44 585 aaKnown RBP13.32□□□□□ -0.28
SNAI1-201ENST00000244050 ELOVL4Q9GZR5 314 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 SMYD3Q9H7B4 428 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNAI1-201ENST00000244050 C2CD2Q9Y426 696 aa13.32□□□□□ -0.28
SNAI1-201ENST00000244050 LRCH4O75427 683 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 FSBPO95073 299 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 VDRP11473 427 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 SYN1P17600 705 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 MAGEA4P43358 317 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 YARSP54577 528 aaKnown RBP13.31□□□□□ -0.28
SNAI1-201ENST00000244050 PPARDQ03181 441 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 IFT88Q13099 833 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 MORF4L2Q15014 288 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 KCNA10Q16322 511 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 GDF6Q6KF10 455 aaPredicted RBP13.31□□□□□ -0.28
SNAI1-201ENST00000244050 RSPH3Q86UC2 560 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 TTC13Q8NBP0 860 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 JOSD2Q8TAC2 188 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 KIF12Q96FN5 646 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 PWWP2AQ96N64 755 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 TWNKQ96RR1 684 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 CPXM1Q96SM3 734 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 RBM15Q96T37 977 aaKnown RBP eCLIP13.31□□□□□ -0.281e-6■■■■■ 27.3
SNAI1-201ENST00000244050 PCDH9Q9HC56 1237 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 SNTG2Q9NY99 539 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 KIAA1257Q9ULG3 409 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 TPX2Q9ULW0 747 aaKnown RBP13.31□□□□□ -0.28
SNAI1-201ENST00000244050 PDCD11Q14690 1871 aaKnown RBP13.31□□□□□ -0.28
SNAI1-201ENST00000244050 GOLGA8SH3BPF8 625 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 CDH16O75309 829 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 MICAL2O94851 1124 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 ERBB2P04626 1255 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 GPD2P43304 727 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 MAGEA10P43363 369 aaPredicted RBP13.31□□□□□ -0.28
SNAI1-201ENST00000244050 ARSEP51690 589 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 MRPS6P82932 125 aaKnown RBP13.31□□□□□ -0.28
SNAI1-201ENST00000244050 RBP5P82980 135 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 INCA1Q0VD86 236 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 BBS12Q6ZW61 710 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 RIBC1Q8N443 379 aaPredicted RBP13.31□□□□□ -0.28
SNAI1-201ENST00000244050 GLIS1Q8NBF1 620 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 CMASQ8NFW8 434 aaPredicted RBP13.31□□□□□ -0.28
SNAI1-201ENST00000244050 P3H4Q92791 437 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 HPDLQ96IR7 371 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 CABS1Q96KC9 395 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 TTC25Q96NG3 672 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 DNAJC17Q9NVM6 304 aaKnown RBP13.31□□□□□ -0.28
SNAI1-201ENST00000244050 TJP2Q9UDY2 1190 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 ACTL7BQ9Y614 415 aa13.31□□□□□ -0.28
SNAI1-201ENST00000244050 KDELR1P24390 212 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 IL1R2P27930 398 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 LIG3P49916 1009 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 RNASEH2BQ5TBB1 312 aaKnown RBP13.3□□□□□ -0.28
SNAI1-201ENST00000244050 VSTM1Q6UX27 236 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 PIGWQ7Z7B1 504 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 PRUNE1Q86TP1 453 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 MICALL1Q8N3F8 863 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 PCSK9Q8NBP7 692 aaKnown RBP13.3□□□□□ -0.28
SNAI1-201ENST00000244050 KLHDC9Q8NEP7 349 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 SNX27Q96L92 541 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 CFAP57Q96MR6 1250 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 PRMT1Q99873 361 aaKnown RBP13.3□□□□□ -0.28
SNAI1-201ENST00000244050 APOL6Q9BWW8 343 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 PHACTR1Q9C0D0 580 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 MIS12Q9H081 205 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms