RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 SLC4A5Q9BY07 1137 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 S1PR5Q9H228 398 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 PIDD1Q9HB75 910 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 ST7Q9NRC1 585 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 SEPT11Q9NVA2 429 aaKnown RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 CHORDC1Q9UHD1 332 aaPredicted RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 MAGED2Q9UNF1 606 aaPredicted RBP10.73□□□□□ -0.69
HMGCL-201ENST00000235958 CEP83Q9Y592 693 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 NOTCH4Q99466 2003 aa10.73□□□□□ -0.69
HMGCL-201ENST00000235958 A0A087X0T9 212 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 FAM170AA1A519 330 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 GOLGA6L6A8MZA4 724 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 PIK3R2O00459 728 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 XYLBO75191 536 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 TBX10O75333 385 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 RTN3O95197 1032 aaPredicted RBP10.72□□□□□ -0.69
HMGCL-201ENST00000235958 LSM8O95777 96 aaKnown RBP10.72□□□□□ -0.69
HMGCL-201ENST00000235958 FAM228BP0C875 321 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 GZMAP12544 262 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 LCP1P13796 627 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 YWHAQP27348 245 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 PLA2G4AP47712 749 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 RPL34P49207 117 aaKnown RBP10.72□□□□□ -0.69
HMGCL-201ENST00000235958 NOMO3P69849 1222 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 MAPK8IP2Q13387 824 aaPredicted RBP10.72□□□□□ -0.69
HMGCL-201ENST00000235958 CLEC16AQ2KHT3 1053 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 ASTE1Q2TB18 679 aaPredicted RBP10.72□□□□□ -0.69
HMGCL-201ENST00000235958 RAB41Q5JT25 222 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 ACAD10Q6JQN1 1059 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 GPRIN1Q7Z2K8 1008 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 GRASPQ7Z6J2 395 aaPredicted RBP10.72□□□□□ -0.69
HMGCL-201ENST00000235958 GPR149Q86SP6 731 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 TMEM110Q86TL2 294 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 ITIH5Q86UX2 942 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 ERICH1Q86X53 443 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 SCUBE3Q8IX30 993 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 C1orf131Q8NDD1 294 aaKnown RBP10.72□□□□□ -0.69
HMGCL-201ENST00000235958 OLIG1Q8TAK6 271 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 SMG7Q92540 1137 aaKnown RBP10.72□□□□□ -0.69
HMGCL-201ENST00000235958 PPP1R13BQ96KQ4 1090 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 MYRFLQ96LU7 910 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 NOX5Q96PH1 765 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 CORO1BQ9BR76 489 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 LRRC3Q9BY71 257 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 ADAM7Q9H2U9 754 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 SFXN1Q9H9B4 322 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 NHEJ1Q9H9Q4 299 aaPredicted RBP10.72□□□□□ -0.69
HMGCL-201ENST00000235958 LRRC4Q9HBW1 653 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 PNPLA8Q9NP80 782 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 HCFC1R1Q9NWW0 138 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 COMMD8Q9NX08 183 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 DNMT3BQ9UBC3 853 aaKnown RBP10.72□□□□□ -0.69
HMGCL-201ENST00000235958 USP3Q9Y6I4 520 aa10.72□□□□□ -0.69
HMGCL-201ENST00000235958 SSU72P8A0A1W2PR75 194 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 H3BQ06 376 aaPredicted RBP10.71□□□□□ -0.69
HMGCL-201ENST00000235958 FTLP02792 175 aaPredicted RBP10.71□□□□□ -0.69
HMGCL-201ENST00000235958 POU2F2P09086 479 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 USP17L7P0C7H9 530 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 KCNA5P22460 613 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 ACADSBP45954 432 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 TKTL1P51854 596 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 SLC5A3P53794 718 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 GSDMDP57764 484 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 NTHL1P78549 312 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 ITIH3Q06033 890 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 IFRD2Q12894 506 aaPredicted RBP10.71□□□□□ -0.69
HMGCL-201ENST00000235958 TAF10Q12962 218 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 PDCLQ13371 301 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 CLUL1Q15846 466 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 ATAT1Q5SQI0 421 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 CYP4A22Q5TCH4 519 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 PM20D1Q6GTS8 502 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 CES5AQ6NT32 575 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 CYP26C1Q6V0L0 522 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 VPS36Q86VN1 386 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 TMTC1Q8IUR5 882 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 MAFAQ8NHW3 353 aaPredicted RBP10.71□□□□□ -0.69
HMGCL-201ENST00000235958 NDRG1Q92597 394 aaKnown RBP10.71□□□□□ -0.69
HMGCL-201ENST00000235958 HLA-CQ95604 372 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 C18orf8Q96DM3 657 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 PDLIM2Q96JY6 352 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 CCDC42Q96M95 316 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 CPXM1Q96SM3 734 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 TTLL2Q9BWV7 592 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 MIS12Q9H081 205 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 FBXO44Q9H4M3 255 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 UBE2ZQ9H832 354 aaPredicted RBP10.71□□□□□ -0.69
HMGCL-201ENST00000235958 ZNF334Q9HCZ1 680 aaPredicted RBP10.71□□□□□ -0.69
HMGCL-201ENST00000235958 CYLDQ9NQC7 956 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 TAS2R14Q9NYV8 317 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 EHD2Q9NZN4 543 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 CDH22Q9UJ99 828 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 SCML2Q9UQR0 700 aa10.71□□□□□ -0.69
HMGCL-201ENST00000235958 PRUNE2Q8WUY3 3088 aa10.71□□□□□ -0.7
HMGCL-201ENST00000235958 FAM92AA1XBS5 289 aa10.7□□□□□ -0.7
HMGCL-201ENST00000235958 TMCO5BA8MYB1 307 aa10.7□□□□□ -0.7
HMGCL-201ENST00000235958 E5RJQ4 531 aa10.7□□□□□ -0.7
HMGCL-201ENST00000235958 AKR1B10O60218 316 aa10.7□□□□□ -0.7
HMGCL-201ENST00000235958 RTN2O75298 545 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms