RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 HSPH1Q92598 858 aa18.24■□□□□ 0.51
VRK1-201ENST00000216639 LPIN3Q9BQK8 851 aa18.24■□□□□ 0.51
VRK1-201ENST00000216639 PABPC3Q9H361 631 aaKnown RBP18.24■□□□□ 0.51
VRK1-201ENST00000216639 GABRDO14764 452 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 NDC80O14777 642 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 XPO1O14980 1071 aaKnown RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 MYZAPP0CAP1 466 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 PTPN1P18031 435 aaKnown RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 PAX3P23760 479 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 MAP2K2P36507 400 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 SCNN1GP51170 649 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 CLCNKBP51801 687 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 ADCY2Q08462 1091 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 TAZQ16635 292 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 BOLA3Q53S33 107 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 BBS12Q6ZW61 710 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 SLC26A9Q7LBE3 791 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 ARCQ7LC44 396 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 MAP7D3Q8IWC1 876 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 RNF169Q8NCN4 708 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 PIWIL1Q96J94 861 aaKnown RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 FAM118BQ9BPY3 351 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 MAK16Q9BXY0 300 aaKnown RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 DNPEPQ9ULA0 475 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 NEU2Q9Y3R4 380 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 CST8O60676 142 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 RARGP13631 454 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 LCP1P13796 627 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 APLP1P51693 650 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 VCPP55072 806 aaKnown RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 PLCB3Q01970 1234 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 IFFO1Q0D2I5 559 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 TRIP13Q15645 432 aaPredicted RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 CDO1Q16878 200 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 TRIM71Q2Q1W2 868 aaKnown RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 C15orf59Q2T9L4 293 aaPredicted RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 CCDC14Q49A88 953 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 DENND2CQ68D51 928 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 RFX6Q8HWS3 928 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 SLAIN1Q8ND83 568 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 NKD2Q969F2 451 aaPredicted RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 CFAP57Q96MR6 1250 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 TBCBQ99426 244 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 ADAM2Q99965 735 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 DUSP16Q9BY84 665 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 HMX1Q9NP08 348 aaPredicted RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 MIOSQ9NXC5 875 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 DDX43Q9NXZ2 648 aaKnown RBP18.23■□□□□ 0.51
VRK1-201ENST00000216639 ANAPC5Q9UJX4 755 aa18.23■□□□□ 0.51
VRK1-201ENST00000216639 HMGB1P1B2RPK0 211 aaPredicted RBP18.22■□□□□ 0.51
VRK1-201ENST00000216639 H0YGN5 161 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 MGEA5O60502 916 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 ITGAVP06756 1048 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 PTPN9P43378 593 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 ATP11AP98196 1134 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 PDK2Q15119 407 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 TTMPQ5BVD1 217 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 EFHC1Q5JVL4 640 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 TRNP1Q6NT89 227 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 CEP128Q6ZU80 1094 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 FAM172AQ8WUF8 416 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 TEKT4Q8WW24 435 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 ARL8AQ96BM9 186 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 MED10Q9BTT4 135 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 CALN1Q9BXU9 219 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 NGRNQ9NPE2 291 aaKnown RBP18.22■□□□□ 0.51
VRK1-201ENST00000216639 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.22■□□□□ 0.51
VRK1-201ENST00000216639 NFS1Q9Y697 457 aa18.22■□□□□ 0.51
VRK1-201ENST00000216639 INHAP05111 366 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 NUDT17P0C025 328 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 IVDP26440 423 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 ITGA8P53708 1063 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 CDH6P55285 790 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 PRMT2P55345 433 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 ZNF844Q08AG5 666 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 GRIK3Q13003 919 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 TFDP2Q14188 446 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 KRT81Q14533 505 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 SCYL2Q6P3W7 929 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 ZNF771Q7L3S4 317 aaPredicted RBP18.21■□□□□ 0.51
VRK1-201ENST00000216639 CROCCP2Q86T23 111 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 FUKQ8N0W3 1084 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 ALLCQ8N6M5 410 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 SPATA18Q8TC71 538 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 ATP6V1G3Q96LB4 118 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 B3GNT5Q9BYG0 378 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 TMBIM4Q9HC24 238 aa18.21■□□□□ 0.51
VRK1-201ENST00000216639 CASTOR2A6NHX0 329 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 GABBR2O75899 941 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 ODC1P11926 461 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 NPR3P17342 541 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 ACAT1P24752 427 aaKnown RBP18.2■□□□□ 0.5
VRK1-201ENST00000216639 KLRC2P26717 231 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 DYNLT1P63172 113 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 TAF5Q15542 800 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 OASLQ15646 514 aaKnown RBP18.2■□□□□ 0.5
VRK1-201ENST00000216639 UPP1Q16831 310 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 SH3PXD2AQ5TCZ1 1133 aa18.2■□□□□ 0.5
VRK1-201ENST00000216639 TRMT10CQ7L0Y3 403 aaKnown RBP18.2■□□□□ 0.5
VRK1-201ENST00000216639 HOOK3Q86VS8 718 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms