RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SATB1Q01826 763 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 CA9Q16790 459 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 ATF7IP2Q5U623 682 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 BZW1Q7L1Q6 419 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 RSPH3Q86UC2 560 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 BBOF1Q8ND07 529 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 CLEC4CQ8WTT0 213 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 ANKRD36BP1Q96IX9 119 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 DDX50Q9BQ39 737 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 TSSK1BQ9BXA7 367 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 OSBPL1AQ9BXW6 950 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 MANSC1Q9H8J5 431 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 RPF1Q9H9Y2 349 aaKnown RBP15.76■□□□□ 0.11
EFNB1-201ENST00000204961 RABGEF1Q9UJ41 708 aa15.76■□□□□ 0.11
EFNB1-201ENST00000204961 KIAA1217Q5T5P2 1943 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 LACTBL1A8MY62 500 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 SPATA31C2B4DYI2 1134 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 KRT36O76013 467 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 ZNF286BP0CG31 522 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 TBXAS1P24557 533 aaPredicted RBP15.75■□□□□ 0.11
EFNB1-201ENST00000204961 ARFIP2P53365 341 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
EFNB1-201ENST00000204961 JADE1Q6IE81 842 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 TLDC1Q6P9B6 456 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 PHF13Q86YI8 300 aaPredicted RBP15.75■□□□□ 0.11
EFNB1-201ENST00000204961 KCTD17Q8N5Z5 321 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 TTC16Q8NEE8 873 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 TTC1Q99614 292 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 TMEM109Q9BVC6 243 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 RNPEPQ9H4A4 650 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 DENND2DQ9H6A0 471 aaPredicted RBP15.75■□□□□ 0.11
EFNB1-201ENST00000204961 KLK14Q9P0G3 267 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 GPR25O00155 361 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 GYG2O15488 501 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 TBC1D12O60347 775 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 LCP1P13796 627 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 CAV1Q03135 178 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 MUM1Q2TAK8 710 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 TRMT10BQ6PF06 316 aaKnown RBP15.75■□□□□ 0.11
EFNB1-201ENST00000204961 FAM149B1Q96BN6 582 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 PEBP4Q96S96 227 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 DHX35Q9H5Z1 703 aaKnown RBP15.75■□□□□ 0.11
EFNB1-201ENST00000204961 DHX33Q9H6R0 707 aaKnown RBP15.75■□□□□ 0.11
EFNB1-201ENST00000204961 CYP4F11Q9HBI6 524 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 SNX9Q9Y5X1 595 aa15.75■□□□□ 0.11
EFNB1-201ENST00000204961 LOC100653049A0A140TA62 436 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 CFAP73A6NFT4 308 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 H3BRJ5 948 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 DKC1O60832 514 aaKnown RBP eCLIP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 USP12O75317 370 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 KRT34O76011 436 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 NPTXRO95502 500 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 TROVE2P10155 538 aaKnown RBP eCLIP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 KHDC1Q4VXA5 237 aaKnown RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 CAPRIN2Q6IMN6 1127 aaKnown RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 TCRBV9S1A1TA0A576 114 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 EDF1O60869 148 aaKnown RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 ZMPSTE24O75844 475 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 SARNPP82979 210 aaKnown RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 KPNB1Q14974 876 aaKnown RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 TNFAIP8L3Q5GJ75 292 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 MPP5Q8N3R9 675 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 PDCD7Q8N8D1 485 aaKnown RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 ATP11CQ8NB49 1132 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 FAM161BQ96MY7 647 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 TMEM120AQ9BXJ8 343 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 ELOVL4Q9GZR5 314 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 PDLIM7Q9NR12 457 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 GREB1LQ9C091 1923 aaPredicted RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 LY75O60449 1722 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 SRRM3A6NNA2 597 aaPredicted RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 ADM5C9JUS6 153 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 GOLGA8TH3BQL2 631 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 PPEF2O14830 753 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 PRPSAP2O60256 369 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 LYPLA1O75608 230 aaPredicted RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 MICAL2O94851 1124 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 T-ENOLP0DO92 83 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 BAG6P46379 1132 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 MAP1SQ66K74 1059 aaPredicted RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 CTU1Q7Z7A3 348 aaKnown RBP15.74■□□□□ 0.11
EFNB1-201ENST00000204961 TXLNGQ9NUQ3 528 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 PGAP2Q9UHJ9 254 aa15.74■□□□□ 0.11
EFNB1-201ENST00000204961 SOWAHBA6NEL2 793 aa15.73■□□□□ 0.11
EFNB1-201ENST00000204961 OGTO15294 1046 aa15.73■□□□□ 0.11
EFNB1-201ENST00000204961 FARP2O94887 1054 aaPredicted RBP15.73■□□□□ 0.11
EFNB1-201ENST00000204961 ZBED1O96006 694 aa15.73■□□□□ 0.11
EFNB1-201ENST00000204961 LDHAP00338 332 aaKnown RBP15.73■□□□□ 0.11
EFNB1-201ENST00000204961 OAS1P00973 400 aaKnown RBP15.73■□□□□ 0.11
EFNB1-201ENST00000204961 ESRRAP11474 423 aaPredicted RBP15.73■□□□□ 0.11
EFNB1-201ENST00000204961 LMNB2Q03252 620 aa15.73■□□□□ 0.11
EFNB1-201ENST00000204961 DPYSL3Q14195 570 aa15.73■□□□□ 0.11
EFNB1-201ENST00000204961 ZNF268Q14587 947 aaPredicted RBP15.73■□□□□ 0.11
EFNB1-201ENST00000204961 OASLQ15646 514 aaKnown RBP15.73■□□□□ 0.11
EFNB1-201ENST00000204961 BRSK2Q8IWQ3 736 aa15.73■□□□□ 0.11
EFNB1-201ENST00000204961 PPIL6Q8IXY8 311 aa15.73■□□□□ 0.11
EFNB1-201ENST00000204961 NLRP7Q8WX94 980 aa15.73■□□□□ 0.11
EFNB1-201ENST00000204961 AS3MTQ9HBK9 375 aa15.73■□□□□ 0.11
EFNB1-201ENST00000204961 NFKBIEO00221 500 aa15.73■□□□□ 0.11
EFNB1-201ENST00000204961 COPEO14579 308 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms