RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 PABPC3Q9H361 631 aaKnown RBP13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 CDC42EP4Q9H3Q1 356 aaKnown RBP13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 DHX33Q9H6R0 707 aaKnown RBP13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 DDX3YO15523 660 aaKnown RBP13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 SLC26A4O43511 780 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 SNX3O60493 162 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 LCA5LO95447 670 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 CETPP11597 493 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 GZMAP12544 262 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 EPHB2P29323 1055 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 PTENP60484 403 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 CCL14Q16627 93 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 MFSD4BQ5TF39 518 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 RWDD4Q6NW29 188 aaKnown RBP13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 FAM117BQ6P1L5 589 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 BRSK2Q8IWQ3 736 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 MREGQ8N565 214 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 PPM1NQ8N819 430 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 ATL2Q8NHH9 583 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 CEP70Q8NHQ1 597 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 CDK5RAP2Q96SN8 1893 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 SLC13A1Q9BZW2 595 aa13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 NXF3Q9H4D5 531 aaKnown RBP13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 NOCTQ9UK39 431 aaKnown RBP13.49□□□□□ -0.25
PCDHB4-201ENST00000194152 CITO14578 2027 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 CCDC195A0A1B0GUA6 201 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 KCNN4O15554 427 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 HUS1O60921 280 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 CCDC130P13994 396 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 GSTT1P30711 240 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 PHBP35232 272 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 PTDSS1P48651 473 aaKnown RBP13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 COG7P83436 770 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 OTUD4Q01804 1114 aaKnown RBP13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 MAMLD1Q13495 774 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 LAMC2Q13753 1193 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 CCDC142Q17RM4 750 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 DCAF6Q58WW2 860 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 BBOF1Q8ND07 529 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 LMO3Q8TAP4 145 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 MIPOL1Q8TD10 442 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 LRRC37BQ96QE4 947 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 RAB6BQ9NRW1 208 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 MAP3K20Q9NYL2 800 aaKnown RBP13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 GOLGA8CPA6NN73 597 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 E5RJQ4 531 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 PROSCO94903 275 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 SP100P23497 879 aaPredicted RBP13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 OAZ1P54368 228 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 SESN2P58004 480 aaPredicted RBP13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 LMNB2Q03252 620 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 RIPK1Q13546 671 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 DGKDQ16760 1214 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 USP33Q8TEY7 942 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 ZFP42Q96MM3 310 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 UBE2OQ9C0C9 1292 aaKnown RBP13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 SPC25Q9HBM1 224 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 NEU2Q9Y3R4 380 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 NHSQ6T4R5 1651 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 RPTORQ8N122 1335 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 ACKR2O00590 384 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 MAP3K13O43283 966 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 MAFO75444 373 aaPredicted RBP13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 POMCP01189 267 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 CD48P09326 243 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 PEX5P50542 639 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 IL31Q6EBC2 164 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 CENPUQ71F23 418 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 SIX6OS1Q8N1H7 587 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 PDCD7Q8N8D1 485 aaKnown RBP13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 HIC2Q96JB3 615 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 MFSD14AQ96MC6 490 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 NDNQ99608 321 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 SMYD2Q9NRG4 433 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 PRMT7Q9NVM4 692 aaPredicted RBP13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 STOML1Q9UBI4 398 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 TSPAN16Q9UKR8 245 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 SYNPO2Q9UMS6 1093 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 RPS6KL1Q9Y6S9 549 aa13.48□□□□□ -0.25
PCDHB4-201ENST00000194152 CXCL11O14625 94 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 ASAP2O43150 1006 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 MT-ND3P03897 115 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 C4BPAP04003 597 aaKnown RBP13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 SRGAP2BP0DMP2 458 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 TROVE2P10155 538 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 CREB1P16220 341 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 CALB2P22676 271 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 PTPN11Q06124 597 aaPredicted RBP13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 RCN1Q15293 331 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 FITM2Q8N6M3 262 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 RXFP2Q8WXD0 754 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 FAM81BQ96LP2 452 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 VPS33BQ9H267 617 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 PCDH10Q9P2E7 1040 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 PRG3Q9Y2Y8 225 aaPredicted RBP13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 SDK1Q7Z5N4 2213 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 PPEF2O14830 753 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 CBX6O95503 412 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms