RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 ARFGAP1Q8N6T3 406 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 C7orf31Q8N865 590 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 SEC14L1Q92503 715 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 PGM2Q96G03 612 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 APOL6Q9BWW8 343 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 NKIRAS1Q9NYS0 192 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 CACNG4Q9UBN1 327 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 GTF2IRD1Q9UHL9 959 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 LSM8O95777 96 aaKnown RBP11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 NDST1P52848 882 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 AUHQ13825 339 aaKnown RBP11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 ZNF268Q14587 947 aaPredicted RBP11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 CCDC6Q16204 474 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 EXOC3L1Q86VI1 746 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 LONP2Q86WA8 852 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 FITM2Q8N6M3 262 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 PIWIL1Q96J94 861 aaKnown RBP11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 TSC22D3Q99576 134 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 F8VP50 259 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 ERBB2P04626 1255 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 ATICP31939 592 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 CRYBB1P53674 252 aaPredicted RBP11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 FCGRTP55899 365 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 PTPN11Q06124 597 aaPredicted RBP11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 XKR4Q5GH76 650 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 NAF1Q96HR8 494 aaKnown RBP11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 RMDN2Q96LZ7 410 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 MCEEQ96PE7 176 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 ZCWPW1Q9H0M4 648 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 GPBP1L1Q9HC44 474 aaPredicted RBP11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 ARL2BPQ9Y2Y0 163 aa11.84□□□□□ -0.51
GPATCH1-201ENST00000170564 SMIM28A0A1B0GU29 152 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 TLR3O15455 904 aaKnown RBP11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 GABBR2O75899 941 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 STAU1O95793 577 aaKnown RBP11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 TARSP26639 723 aaKnown RBP11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 PTGIRP43119 386 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 NKX3-2P78367 333 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 GRIK3Q13003 919 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 SETDB1Q15047 1291 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 LMNTD2Q8IXW0 634 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 UBL4BQ8N7F7 174 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 GSTCDQ8NEC7 633 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 C1orf54Q8WWF1 131 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 TMEM176AQ96HP8 235 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 PLEKHA5Q9HAU0 1116 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 ZDHHC18Q9NUE0 388 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 IPPQ9Y573 584 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 LRRD1A4D1F6 860 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 SEPT4O43236 478 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 MICAL2O94851 1124 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 GPD2P43304 727 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 RIPK1Q13546 671 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 SLC13A5Q86YT5 568 aaPredicted RBP11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 JOSD2Q8TAC2 188 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 EPB41L4BQ9H329 900 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 ZFATQ9P243 1243 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 HAO1Q9UJM8 370 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 FAM187AA6NFU0 413 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 PTGESO14684 152 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 TP73O15350 636 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 RIPK2O43353 540 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 SMNDC1O75940 238 aaKnown RBP eCLIP11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 CD19P15391 556 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 ERFP50548 548 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 POLE2P56282 527 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 RBP5P82980 135 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 KYNUQ16719 465 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 KYAT1Q16773 422 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 CCDC142Q17RM4 750 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 SOWAHAQ2M3V2 549 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 RAB6CQ53S08 254 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 C9orf57Q5W0N0 161 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 TRNP1Q6NT89 227 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 ZDHHC24Q6UX98 284 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 SMC1BQ8NDV3 1235 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 FEZF2Q8TBJ5 459 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 KBTBD7Q8WVZ9 684 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 TRIM11Q96F44 468 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 ZFP42Q96MM3 310 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 PITPNM3Q9BZ71 974 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 RAB6CQ9H0N0 254 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 LHX5Q9H2C1 402 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 DPEP3Q9H4B8 488 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 PARVAQ9NVD7 372 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 KLHL11Q9NVR0 708 aa11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 R3HDM2Q9Y2K5 976 aaKnown RBP11.83□□□□□ -0.52
GPATCH1-201ENST00000170564 SPAG7O75391 227 aa11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 LUC7L3O95232 432 aaKnown RBP11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 FGFR1P11362 822 aa11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 NEFHP12036 1026 aa11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 RFC1P35251 1148 aaPredicted RBP11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 MUM1Q2TAK8 710 aa11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 ERP27Q96DN0 273 aa11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 PWWP2AQ96N64 755 aa11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 NUDCD1Q96RS6 583 aa11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 KATNAL1Q9BW62 490 aa11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 NKX1-2Q9UD57 310 aaPredicted RBP11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 BARX2Q9UMQ3 279 aaPredicted RBP11.82□□□□□ -0.52
GPATCH1-201ENST00000170564 PIRO00625 290 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms