RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Lyrm1Q9CQB7 122 aa10.4□□□□□ -0.74
Col6a5-203ENSMUST00000190193 Dis3Q9CSH3 958 aaKnown RBP10.4□□□□□ -0.74
Col6a5-203ENSMUST00000190193 A0A1Y7VP24 259 aa10.4□□□□□ -0.74
Col6a5-203ENSMUST00000190193 Gm5160F8VPN3 147 aa10.4□□□□□ -0.74
Col6a5-203ENSMUST00000190193 Nmt2O70311 529 aa10.4□□□□□ -0.74
Col6a5-203ENSMUST00000190193 Olfr832Q7TRG9 312 aa10.4□□□□□ -0.74
Col6a5-203ENSMUST00000190193 Epb41l5Q8BGS1 731 aa10.4□□□□□ -0.74
Col6a5-203ENSMUST00000190193 Kbtbd4Q8R179 534 aa10.4□□□□□ -0.74
Col6a5-203ENSMUST00000190193 Myo1hQ9D6A1 958 aa10.4□□□□□ -0.74
Col6a5-203ENSMUST00000190193 Dcun1d1Q9QZ73 259 aa10.4□□□□□ -0.74
Col6a5-203ENSMUST00000190193 Gm28168A0A087WNP1 180 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Ccdc163A2AGD7 326 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Gm17093F6XGJ4 214 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Gm6408J3QNG1 320 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Rrm2P11157 390 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Fam167bP17257 162 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Elac2Q80Y81 831 aaKnown RBP10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Eif3lQ8QZY1 564 aaKnown RBP10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Q9D937 123 aaKnown RBP10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Slc5a4aQ9ET37 656 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Kctd14A0A0U1RNG7 287 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Pramef20B1ARV6 477 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 EXOC1LB9EK06 172 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 HmbsP22907 361 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Eepd1Q3TGW2 569 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Tmem26Q3UP23 366 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Fbxo39Q5NBU5 443 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Teddm1aQ810U2 305 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Mettl21eQ8CDZ2 244 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Sugp1Q8CH02 643 aaKnown RBP10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Acsm2Q8K0L3 575 aa10.4□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Gm28897A0A087WP44 222 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Ptch2O35595 1182 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Ephx4Q6IE26 359 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Mapre3Q6PER3 281 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Bsdc1Q80Y55 427 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Fam102bQ8BQS4 339 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 4921511C20RikQ8BVT7 469 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Vcpip1Q8CDG3 1220 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 BfarQ8R079 450 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Rev1Q920Q2 1249 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Tmco1Q921L3 188 aaKnown RBP10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Map3k20Q9ESL4 802 aaKnown RBP10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 MeiocA2AG06 965 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 4930579F01RikE9Q3L6 325 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Unc5cO08747 931 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Ctnnd2O35927 1247 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Cdca2Q14B71 982 aaKnown RBP10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 PnocQ64387 187 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Tma7Q8K003 64 aaKnown RBP10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Plcl2Q8K394 1128 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 NfkbizQ9EST8 728 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Gprc5dQ9JIL6 344 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Nfu1Q9QZ23 255 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Angpt1O08538 498 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 CrymO54983 313 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Il17raQ60943 864 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Defa17Q64016 82 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Ccnt2Q7TQK0 723 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Oas1dQ8VI95 361 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 4930503E14RikQ9D583 177 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Mtmr2Q9Z2D1 643 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Tap1P21958 724 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 PrlrQ08501 608 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Traf3Q60803 567 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Scd4Q6T707 353 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Mtg1Q8R2R6 326 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Mrpl1Q99N96 336 aaKnown RBP10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Pkp3Q9QY23 797 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Ap4b1Q9WV76 738 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Scn8aQ9WTU3 1978 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Cdk16Q04735 496 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Gpd1lQ3ULJ0 351 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Atp11bQ6DFW5 1175 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Pcdh18Q8VHR0 1134 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 B3galt6Q91Z92 325 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Ap3m1Q9JKC8 418 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Slc2a4P14142 509 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Btbd3P58545 530 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Olfml2bQ3V1G4 746 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Tex24Q5DP50 351 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Stxbp2Q64324 593 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Sfrp1Q8C4U3 314 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Cadm1Q8R5M8 456 aaKnown RBP10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Pcdha10Q91Y20 946 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Ap3s1Q9DCR2 193 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Capn10Q9ESK3 666 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Ddx39bQ9Z1N5 428 aaKnown RBP10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Lamb1P02469 1786 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Gm21488A0A087WR99 222 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Sec22bO08547 215 aaKnown RBP10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Hps1O08983 704 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Anxa5P48036 319 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Rcsd1Q3UZA1 412 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Tyw1Q8BJM7 721 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 RbakQ8BQC8 711 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Wwp1Q8BZZ3 918 aa10.39□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Hsd17b1P51656 344 aa10.38□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Smtnl2Q8CI12 456 aa10.38□□□□□ -0.75
Col6a5-203ENSMUST00000190193 Pcdhb21Q91V48 774 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms