RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Sh3tc2Q80VA5 1289 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 GzmnQ920S1 248 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Fam3aQ9D8T0 230 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Atg7Q9D906 698 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Trim54Q9ERP3 366 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Pcsk1nQ9QXV0 258 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Rab20P35295 233 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Stt3bQ3TDQ1 823 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Cd300aQ6SJQ0 318 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Fam163bQ8BUM6 167 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 MiosQ8VE19 875 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Olfr1494Q8VGP8 315 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Iqcf1Q9D9K8 182 aa24.05■■□□□ 1.44
Cln6-201ENSMUST00000034776 Fam155bA2BDP1 471 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Mup13L7N222 235 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Nek2O35942 443 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Soat2O88908 525 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 GsrP47791 500 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Cyp4f37Q3V1F1 546 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Tfdp2Q64163 446 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Kif11Q6P9P6 1052 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Tarsl2Q8BLY2 790 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Uroc1Q8VC12 676 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Fam114a2Q8VE88 497 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Slc39a3Q99K24 317 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Abcf2Q99LE6 628 aaKnown RBP24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Fuca1Q99LJ1 452 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Chordc1Q9D1P4 331 aaKnown RBP24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Fam114a1Q9D281 569 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Tnni1Q9WUZ5 187 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Gabbr1Q9WV18 960 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Tbc1d16A2ABG4 766 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Ppp1r36D3Z0R2 411 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Gm10720D3Z1I5 223 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 DgkdE9PUQ8 1220 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Gnrh1P13562 90 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 InscQ3HNM7 579 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 EmsyQ8BMB0 1264 aaKnown RBP24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Tmem120aQ8C1E7 343 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Ago3Q8CJF9 860 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Pcdhb6Q91XZ4 772 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 St13Q99L47 371 aaKnown RBP24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Slc25a19Q9DAM5 318 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Snx1Q9WV80 522 aa24.04■■□□□ 1.44
Cln6-201ENSMUST00000034776 Fam81bA0A140LI28 432 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Gm4788E9Q8B5 879 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Ptpn9O35239 593 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Aff1O88573 1216 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 AfpP02772 605 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Itga1Q3V3R4 1179 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Tdrd5Q5VCS6 1040 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Kiaa1328Q6NZK5 612 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Igsf3Q6ZQA6 1194 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 TwistnbQ78WZ7 330 aaKnown RBP24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Stk40Q7TNL3 435 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Ankrd52Q8BTI7 1076 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Osbpl1aQ91XL9 950 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Them5Q9CQJ0 248 aa24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Ep400Q8CHI8 3072 aaKnown RBP24.03■■□□□ 1.44
Cln6-201ENSMUST00000034776 Atp8b4A2ANX3 1194 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Patl2A2ARM1 529 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Gm10722F6VLK5 217 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 XntrpcF8VQM8 1264 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Acot1O55137 419 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Rdh7O88451 316 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Ap1g2O88512 791 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Casp14O89094 257 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Zfp42P22227 288 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 CtswP56203 371 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Irx1P81068 480 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 FaxcQ3UMF9 409 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Zdhhc19Q810M5 347 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Lig4Q8BTF7 911 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 MrgpreQ91ZB7 310 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Rec114Q9CWH4 259 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Psma8Q9CWH6 250 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Cacng4Q9JJV4 327 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Dennd5bA2RSQ0 1274 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 JrklB2RRL2 523 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Gm7694J3QNH8 270 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Clcn6O35454 870 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 RxrbP28704 520 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Eif3eP60229 445 aaKnown RBP24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Ifnl2Q4VK74 193 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Elf1Q60775 612 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Tbc1d12Q6A039 696 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Q6DFW0 481 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 H2-Q4Q8HWB2 354 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Msantd4Q91YU3 345 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Krt71Q9R0H5 524 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Cpxm1Q9Z100 722 aa24.02■■□□□ 1.44
Cln6-201ENSMUST00000034776 Srsf11E9Q6E5 511 aaKnown RBP24.01■■□□□ 1.43
Cln6-201ENSMUST00000034776 Trim38Q5SZ99 471 aa24.01■■□□□ 1.43
Cln6-201ENSMUST00000034776 PterQ60866 349 aa24.01■■□□□ 1.43
Cln6-201ENSMUST00000034776 Bcar1Q61140 874 aa24.01■■□□□ 1.43
Cln6-201ENSMUST00000034776 Gpsm1Q6IR34 673 aa24.01■■□□□ 1.43
Cln6-201ENSMUST00000034776 Xpo1Q6P5F9 1071 aaKnown RBP24.01■■□□□ 1.43
Cln6-201ENSMUST00000034776 Mpp4Q6P7F1 635 aa24.01■■□□□ 1.43
Cln6-201ENSMUST00000034776 Nipal4Q8BZF2 406 aa24.01■■□□□ 1.43
Cln6-201ENSMUST00000034776 Mgrn1Q9D074 532 aa24.01■■□□□ 1.43
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms