RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Txndc9Q9CQ79 226 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Psmd9Q9CR00 222 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Smyd3Q9CWR2 428 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Doc2gQ9ESN1 387 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gyg1Q9R062 333 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Pds5aQ6A026 1332 aa10.3□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Slc6a16A0A1L1SR47 742 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 B020004C17RikJ3QP07 232 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Serpinb9O08797 374 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 FechP22315 420 aaKnown RBP10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cdo1P60334 200 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 YwhahP68510 246 aaKnown RBP10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cdk16Q04735 496 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ankrd34bQ3UUF8 508 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Btg1-ps1Q3V0S2 161 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Btg1-ps2Q3V0X0 161 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ppp1r13lQ5I1X5 824 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Atg9bQ6EBV9 922 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Frmd5Q6P5H6 517 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Q8BP99 230 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Lin7aQ8JZS0 233 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Pcdhb1Q91Y08 818 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Zbed3Q9D0L1 228 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Arih1Q9Z1K5 555 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Speer4cG3UXD1 256 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gm10354K7N6A0 256 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Unc5cO08747 931 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Atp9aO70228 1047 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Lta4hP24527 611 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Msr1P30204 458 aaKnown RBP10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Serpina5P70458 405 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Klra6Q60653 266 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Zcchc2Q69ZB8 1166 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Far2Q7TNT2 515 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Krr1Q8BGA5 380 aaKnown RBP10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Rd3Q8BRE0 195 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Tlk1Q8C0V0 766 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Sash3Q8K352 380 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Sorcs3Q8VI51 1219 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Fuca2Q99KR8 461 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 LactbQ9EP89 551 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Tmem59Q9QY73 323 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Lypla2Q9WTL7 231 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Vmn2r77L7N2B7 854 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Apba3O88888 571 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 VcpQ01853 806 aaKnown RBP10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Atp13a4Q5XF90 1193 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Antxr2Q6DFX2 487 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 E2f7Q6S7F2 904 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 ScocQ78YZ6 125 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cpa1Q7TPZ8 419 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Tbc1d10bQ8BHL3 798 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Sun2Q8BJS4 731 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Pi4kbQ8BKC8 816 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Zfp263Q8CF60 680 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mov10l1Q99MV5 1187 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mrpl2Q9D773 306 aaKnown RBP10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Rnf25Q9QZR0 456 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 GabreA2AMW3 916 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 TriqkB2B9E1 86 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Akap10O88845 662 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Myl4P09541 193 aaKnown RBP10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Psmb9P28076 219 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 PtpreP49446 699 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Clcn3P51791 818 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Clec4fP70194 548 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 IqcmQ149I8 489 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Spout1Q3UHX9 385 aaKnown RBP10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Pgrmc2Q80UU9 217 aaKnown RBP10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gga3Q8BMI3 718 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Kcnv1Q8BZN2 503 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Sept10Q8C650 452 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Vps37aQ8CHS8 397 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Chordc1Q9D1P4 331 aaKnown RBP10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Scgb2b12S4R2L0 112 aa10.29□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mocs3A2BDX3 460 aaKnown RBP10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 AoahO35298 574 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 ZfrO88532 1074 aaKnown RBP10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ext2P70428 718 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 GscQ02591 256 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Sox10Q04888 466 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Oas1fQ14AZ4 364 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Togaram2Q3TYG6 1002 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ulk3Q3U3Q1 472 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Runx1t1Q61909 577 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Adam6bQ6IMH7 756 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 NostrinQ6WKZ7 506 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 PolnQ7TQ07 864 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 BicralQ8CHH5 1074 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Q8CIL4 281 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Pqbp1Q91VJ5 263 aaKnown RBP10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Akr1c14Q91WT7 323 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Tmem39aQ9CYC3 486 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Oma1Q9D8H7 521 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ccdc103Q9D9P2 237 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ly6iQ9WU67 134 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mettl1Q9Z120 268 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gm43518A0A0G2JGB6 165 aa10.28□□□□□ -0.76
Ldlr-201ENSMUST00000034713 PigrO70570 771 aa10.28□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms