RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Znf426Q8R1D1 550 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Q9CPS8 106 aa16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ppp1r12aQ9DBR7 1029 aaKnown RBP16.89■□□□□ 0.29
Trim28-201ENSMUST00000005705 Has3O08650 554 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Myl1P05977 188 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Serpinh1P19324 417 aaKnown RBP16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Prdx5P99029 210 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Tmprss11eQ5S248 423 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Impg2Q80XH2 1243 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Znf365Q8BG89 408 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rtp1Q8C8C1 263 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Exd1Q8CDF7 570 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Dnajc18Q9CZJ9 357 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Noa1Q9JJG9 693 aaKnown RBP16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Slc8a3S4R2P9 928 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Cacna1fQ9JIS7 1985 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Zfp105G3X9I0 524 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Kbtbd2G3X9X1 623 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Alox15P39654 663 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Hoxc13P50207 328 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 InhbaQ04998 424 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Znf112Q0VAW7 879 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Slc9b2Q5BKR2 547 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Tmem74Q8BQU7 305 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Hsdl1Q8BTX9 330 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Olfr449Q8VGW8 311 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 Actrt1Q9D9J3 376 aa16.88■□□□□ 0.29
Trim28-201ENSMUST00000005705 AlpiF8VPQ6 554 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Exoc7O35250 697 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 ClgnP52194 611 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Adamts10P58459 1104 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Map3k7Q62073 579 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 ErfeQ6PGN1 340 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Nemp1Q6ZQE4 437 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Thnsl1Q8BH55 747 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Fam49aQ8BHZ0 323 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rps6kc1Q8BLK9 1056 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Spats2lQ91WJ7 558 aaKnown RBP16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Cpt1bQ924X2 772 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Pih1d1Q9CQJ2 290 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Sgf29Q9DA08 293 aaKnown RBP16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 PrccQ9EQC8 491 aaKnown RBP16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 4931406B18RikA2RSL7 367 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 1700064H15RikD3Z4D4 81 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 PrkcbP68404 671 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 VcpQ01853 806 aaKnown RBP16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rbm20Q3UQS8 1199 aaKnown RBP16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Dupd1Q8BK84 215 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Fbxl5Q8C2S5 690 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rfx6Q8C7R7 927 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Fgd4Q91ZT5 766 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Nde1Q9CZA6 344 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rtl9Q32KG4 1339 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rtn2O70622 471 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 4930430A15RikQ05AC5 485 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Mfhas1Q3V1N1 1048 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ppp1r12bQ8BG95 976 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ephb1Q8CBF3 984 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Lonp1Q8CGK3 949 aaKnown RBP16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 DaglbQ91WC9 669 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ttc1Q91Z38 292 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rin1Q921Q7 763 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Lrp8Q924X6 996 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Atad3Q925I1 591 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Rassf3Q99P51 232 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Nt5c3aQ9D020 331 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Cyp39a1Q9JKJ9 470 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Arih1Q9Z1K5 555 aa16.87■□□□□ 0.29
Trim28-201ENSMUST00000005705 Cdh16O88338 830 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 PhbP67778 272 aaKnown RBP16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Plk1Q07832 603 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Lrrc14bQ3UJB3 510 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Nuak1Q641K5 658 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Prmt6Q6NZB1 378 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Olfr385Q8VGT1 312 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Agap3Q8VHH5 910 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Dhx36Q8VHK9 1001 aaKnown RBP16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 4921530L21RikQ9CQ47 274 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 4933428M09RikQ9D3X3 192 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Tmem206Q9D771 350 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Akt3Q9WUA6 479 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Gm3424L7N298 263 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Gm8246M0QWX9 263 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 SfnO70456 248 aaKnown RBP16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Kcnq1P97414 668 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Spdye4aQ5IBH6 268 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Klhl17Q6TDP3 640 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Acap2Q6ZQK5 770 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Lamtor4Q8CF66 99 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Dnajc9Q91WN1 259 aaKnown RBP16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Psmd6Q99JI4 389 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ggps1Q9WTN0 300 aa16.86■□□□□ 0.29
Trim28-201ENSMUST00000005705 Foxm1O08696 760 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 En1P09065 401 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Zbtb16Q3UQ17 673 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Ptk6Q64434 451 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Eif2aQ8BJW6 581 aaKnown RBP16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Nipal4Q8BZF2 406 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Stoml1Q8CI66 399 aa16.85■□□□□ 0.29
Trim28-201ENSMUST00000005705 Pdik1lQ8QZR7 341 aa16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms