RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 ATG8P38182 117 aaRIP-Chip data2.17□□□□□ -2.06not detected
snR42snR42 EOS1P53938 366 aa2.17□□□□□ -2.06
snR42snR42 YDR115WQ04598 105 aa2.17□□□□□ -2.06
snR42snR42 ZEO1Q08245 113 aa2.17□□□□□ -2.06
snR42snR42 YDR029WQ12111 104 aa2.17□□□□□ -2.06
snR42snR42 YPL229WQ99395 206 aa2.17□□□□□ -2.06
snR42snR42 SEC4P07560 215 aaKnown RBP2.16□□□□□ -2.06
snR42snR42 YAL064WP39711 94 aa2.16□□□□□ -2.06
snR42snR42 YER076CP40049 302 aa2.16□□□□□ -2.06
snR42snR42 CIN5P40917 295 aa2.16□□□□□ -2.06
snR42snR42 YFL067WP43537 175 aa2.16□□□□□ -2.06
snR42snR42 PKR1Q03880 122 aaKnown RBP2.16□□□□□ -2.06
snR42snR42 YLR118CQ12354 227 aa2.16□□□□□ -2.06
snR42snR42 YOR008C-AQ3E7B9 74 aa2.16□□□□□ -2.06
snR42snR42 RPS22BQ3E7Y3 130 aaKnown RBP2.16□□□□□ -2.06
snR42snR42 ENV10Q99382 181 aa2.16□□□□□ -2.06
snR42snR42 YCR043CP25361 127 aa2.15□□□□□ -2.07
snR42snR42 PET8P38921 284 aa2.15□□□□□ -2.07
snR42snR42 PAU15P40585 124 aa2.15□□□□□ -2.07
snR42snR42 DAN1P47178 298 aa2.15□□□□□ -2.07
snR42snR42 ERV14P53173 138 aa2.15□□□□□ -2.07
snR42snR42 DFM1Q12743 341 aaKnown RBP2.15□□□□□ -2.07
snR42snR42 TRP1P00912 224 aa2.14□□□□□ -2.07
snR42snR42 POR1P04840 283 aaKnown RBP2.14□□□□□ -2.07
snR42snR42 PFY1P07274 126 aa2.14□□□□□ -2.07
snR42snR42 YEL008WP40001 126 aa2.14□□□□□ -2.07
snR42snR42 NSE4P43124 402 aa2.14□□□□□ -2.07
snR42snR42 YJR146WP47174 117 aa2.14□□□□□ -2.07
snR42snR42 LCL1Q02786 101 aa2.14□□□□□ -2.07
snR42snR42 TPT1Q12272 230 aaKnown RBP2.14□□□□□ -2.07
snR42snR42 YCR024C-BQ3E7Z8 88 aa2.14□□□□□ -2.07
snR42snR42 STF1P01098 86 aa2.13□□□□□ -2.07
snR42snR42 HMRA2P0CY13 119 aa2.13□□□□□ -2.07
snR42snR42 PRE1P22141 198 aaKnown RBP2.13□□□□□ -2.07
snR42snR42 CNB1P25296 175 aa2.13□□□□□ -2.07
snR42snR42 YBL081WP38180 368 aaKnown RBP2.13□□□□□ -2.07
snR42snR42 YAR029WP39549 74 aa2.13□□□□□ -2.07
snR42snR42 RPC10P40422 70 aa2.13□□□□□ -2.07
snR42snR42 MMS2P53152 137 aa2.13□□□□□ -2.07
snR42snR42 YIL014C-AQ02598 104 aa2.13□□□□□ -2.07
snR42snR42 HTL1Q9URQ5 78 aa2.13□□□□□ -2.07
snR42snR42 PAU19P0CE85 124 aa2.12□□□□□ -2.07
snR42snR42 PAU21P0CE86 164 aa2.12□□□□□ -2.07
snR42snR42 PAU22P0CE87 164 aa2.12□□□□□ -2.07
snR42snR42 PAU3P25610 124 aa2.12□□□□□ -2.07
snR42snR42 APS1P35181 156 aa2.12□□□□□ -2.07
snR42snR42 RPF1P38805 295 aaKnown RBP2.12□□□□□ -2.07
snR42snR42 VTC1P40046 129 aaRIP-Chip data2.12□□□□□ -2.07not detected
snR42snR42 TOS6P48560 102 aa2.12□□□□□ -2.07
snR42snR42 YGL118CP53132 145 aa2.12□□□□□ -2.07
snR42snR42 MGR2Q02889 113 aa2.12□□□□□ -2.07
snR42snR42 YMR295CQ03559 197 aa2.12□□□□□ -2.07
snR42snR42 YMR175W-AQ3E766 64 aa2.12□□□□□ -2.07
snR42snR42 YLR307C-AQ3E825 87 aa2.12□□□□□ -2.07
snR42snR42 RPL31AP0C2H8 113 aaKnown RBP2.11□□□□□ -2.07
snR42snR42 ATP15P21306 62 aa2.11□□□□□ -2.07
snR42snR42 YBR219CP38317 127 aa2.11□□□□□ -2.07
snR42snR42 PEX22P39718 180 aa2.11□□□□□ -2.07
snR42snR42 CWP2P43497 92 aa2.11□□□□□ -2.07
snR42snR42 HHO1P53551 258 aa2.11□□□□□ -2.07
snR42snR42 CYT2Q00873 224 aa2.11□□□□□ -2.07
snR42snR42 SMD1Q02260 146 aaPredicted RBP2.11□□□□□ -2.07
snR42snR42 YGL041C-BQ3E750 60 aa2.11□□□□□ -2.07
snR42snR42 ECM12O13529 151 aa2.1□□□□□ -2.07
snR42snR42 YJL197C-AP0C5P0 93 aa2.1□□□□□ -2.07
snR42snR42 DDR48P18899 430 aaKnown RBP2.1□□□□□ -2.07
snR42snR42 YCR007CP25354 239 aa2.1□□□□□ -2.07
snR42snR42 SMP1P38128 452 aa2.1□□□□□ -2.07
snR42snR42 GTT1P40582 234 aa2.1□□□□□ -2.07
snR42snR42 YLR194CQ05777 254 aa2.1□□□□□ -2.07
snR42snR42 YLR112WQ12130 139 aa2.1□□□□□ -2.07
snR42snR42 CMC2Q3E7A4 109 aa2.1□□□□□ -2.07
snR42snR42 YMR230W-AQ3E7B5 62 aa2.1□□□□□ -2.07
snR42snR42 Q0032Q9ZZX7 96 aa2.1□□□□□ -2.07
snR42snR42 AQY2P0CD90 149 aa2.09□□□□□ -2.07
snR42snR42 GSP1P32835 219 aaKnown RBP2.09□□□□□ -2.07
snR42snR42 YKL070WP36087 169 aa2.09□□□□□ -2.07
snR42snR42 OXA1P39952 402 aa2.09□□□□□ -2.07
snR42snR42 AIM19P40502 157 aa2.09□□□□□ -2.07
snR42snR42 ABF2Q02486 183 aa2.09□□□□□ -2.07
snR42snR42 PPT2Q12036 173 aa2.09□□□□□ -2.07
snR42snR42 YAL065CO13511 128 aa2.08□□□□□ -2.08
snR42snR42 RPL27BP0C2H7 136 aaKnown RBP2.08□□□□□ -2.08
snR42snR42 GSP2P32836 220 aaKnown RBP2.08□□□□□ -2.08
snR42snR42 SHU1P38751 150 aa2.08□□□□□ -2.08
snR42snR42 YER134CP40081 178 aa2.08□□□□□ -2.08
snR42snR42 POP3P53833 195 aaPredicted RBP2.08□□□□□ -2.08
snR42snR42 ARL3Q02804 198 aa2.08□□□□□ -2.08
snR42snR42 YMR103CQ04436 120 aa2.08□□□□□ -2.08
snR42snR42 YDL241WQ07738 123 aa2.08□□□□□ -2.08
snR42snR42 COA3Q3E7B2 85 aa2.08□□□□□ -2.08
snR42snR42 RPL18AP0CX49 186 aaKnown RBP2.07□□□□□ -2.08
snR42snR42 RPL18BP0CX50 186 aaKnown RBP2.07□□□□□ -2.08
snR42snR42 FYV4P38783 130 aaPredicted RBP2.07□□□□□ -2.08
snR42snR42 COX14P39103 70 aa2.07□□□□□ -2.08
snR42snR42 YGL149WP53116 101 aa2.07□□□□□ -2.08
snR42snR42 AIM11P87275 137 aa2.07□□□□□ -2.08
snR42snR42 YDR042CQ03205 200 aa2.07□□□□□ -2.08
snR42snR42 MHR1Q06630 226 aa2.07□□□□□ -2.08
snR42snR42 YPL261CQ08976 102 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms